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Egr4 early growth response 4 [ Mus musculus (house mouse) ]

Gene ID: 13656, updated on 8-May-2016
Official Symbol
Egr4provided by MGI
Official Full Name
early growth response 4provided by MGI
Primary source
MGI:MGI:99252
See related
Ensembl:ENSMUSG00000071341 Vega:OTTMUSG00000055994
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
NGFIC; NGF1-C; NGFI-C; pAT133
Orthologs
Location:
6 C3; 6 37.48 cM
Exon count:
2
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 6 NC_000072.6 (85511122..85513542, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (85461116..85463536, complement)

Chromosome 6 - NC_000072.6Genomic Context describing neighboring genes Neighboring gene protease-associated domain containing 1 Neighboring gene chaperonin containing Tcp1, subunit 7 (eta) Neighboring gene F-box protein 41 Neighboring gene Alstrom syndrome 1 Neighboring gene N-acetyltransferase 8 (GCN5-related) family member 7 Neighboring gene Alstrom syndrome 1, pseudogene 1

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
RNA polymerase II regulatory region sequence-specific DNA binding ISO
Inferred from Sequence Orthology
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
positive regulation of transcription from RNA polymerase II promoter ISO
Inferred from Sequence Orthology
more info
 
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
early growth response protein 4
Names
EGR-4

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_020596.2NP_065621.1  early growth response protein 4

    See identical proteins and their annotated locations for NP_065621.1

    Status: PROVISIONAL

    Source sequence(s)
    AC104743
    Consensus CDS
    CCDS20297.1
    UniProtKB/Swiss-Prot
    Q9WUF2
    UniProtKB/TrEMBL
    Q3URA9
    Related
    ENSMUSP00000093433, OTTMUSP00000072804, ENSMUST00000095759, OTTMUST00000138489
    Conserved Domains (3) summary
    COG5048
    Location:400458
    COG5048; FOG: Zn-finger [General function prediction only]
    pfam13465
    Location:416441
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:374396
    ZF_C2H2; C2H2 Zn finger [structural motif]

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000072.6 Reference GRCm38.p3 C57BL/6J

    Range
    85511122..85513542 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000028.1 Alternate Mm_Celera

    Range
    87483061..87485363 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)