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LMXM_29_2950 phospholipase c-like protein [ Leishmania mexicana MHOM/GT/2001/U1103 ]

Gene ID: 13451543, updated on 28-Dec-2023

Summary

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Gene symbol
LMXM_29_2950
Gene description
phospholipase c-like protein
Locus tag
LMXM_29_2950
Gene type
protein coding
RNA name
phospholipase c-like protein
RefSeq status
PROVISIONAL
Organism
Leishmania mexicana MHOM/GT/2001/U1103 (strain: MHOM/GT/2001/U1103)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
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Genomic context

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Location:
chromosome: 29
Exon count:
1
Sequence:
Chromosome: 29; NC_018333.1 (1051743..1053956, complement)

Chromosome 29 - NC_018333.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene glyceraldehyde 3-phosphate dehydrogenase,glycosomal

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_018333.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
phospholipase c-like protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_018333.1 Reference assembly

    Range
    1051743..1053956 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003877390.1 → XP_003877439.1  phospholipase c-like protein [Leishmania mexicana MHOM/GT/2001/U1103]

    See identical proteins and their annotated locations for XP_003877439.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E9B168
    Conserved Domains (5) summary
    cd00275
    Location:604 → 730
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08558
    Location:298 → 581
    PI-PLCc_eukaryota; Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins
    PLN02952
    Location:222 → 731
    PLN02952; phosphoinositide phospholipase C
    cd00051
    Location:163 → 215
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam13499
    Location:155 → 215
    EF-hand_7; EF-hand domain pair
Nucleotide Protein
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