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Defb1 defensin beta 1 [ Mus musculus (house mouse) ]

Gene ID: 13214, updated on 8-Dec-2014
Official Symbol
Defb1provided by MGI
Official Full Name
defensin beta 1provided by MGI
Primary source
MGI:MGI:1096878
Locus tag
AL590630.1
See related
Ensembl:ENSMUSG00000044748; Vega:OTTMUSG00000019983
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
BD-1; AW260221
See Defb1 in Epigenomics, MapViewer
Location:
8 A4; 8 10.35 cM
Exon count:
2
Annotation release Status Assembly Chr Location
104 current GRCm38.p2 (GCF_000001635.22) 8 NC_000074.6 (21776555..21795185)

Chromosome 8 - NC_000074.6Genomic Context describing neighboring genes Neighboring gene defensin, alpha, 24 Neighboring gene defensin, alpha, pseudogene 11 Neighboring gene defensin beta 50 Neighboring gene defensin beta 2

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Gene Ontology Provided by MGI

Process Evidence Code Pubs
defense response IEA
Inferred from Electronic Annotation
more info
 
defense response to bacterium IEA
Inferred from Electronic Annotation
more info
 
innate immune response IMP
Inferred from Mutant Phenotype
more info
PubMed 
response to bacterium IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
extracellular region IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
beta-defensin 1
Names
beta-defensin 1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_007843.3NP_031869.1  beta-defensin 1 precursor

    See proteins identical to NP_031869.1

    Status: VALIDATED

    Source sequence(s)
    AI956736, AK142544, DV551556
    Consensus CDS
    CCDS40282.1
    UniProtKB/Swiss-Prot
    P56386
    UniProtKB/TrEMBL
    Q3UQE2
    Related
    ENSMUSP00000051754, OTTMUSP00000021573, ENSMUST00000051017, OTTMUST00000047618
    Conserved Domains (1) summary
    pfam00711
    Location:3468
    Defensin_beta; Beta defensin

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p2 C57BL/6J

Genomic

  1. NC_000074.6 

    Range
    21776555..21795185
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000030.1 

    Range
    23268826..23284384
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)