Format

Send to:

Choose Destination

ZPLD1 zona pellucida like domain containing 1 [ Homo sapiens (human) ]

Gene ID: 131368, updated on 8-Aug-2016
Official Symbol
ZPLD1provided by HGNC
Official Full Name
zona pellucida like domain containing 1provided by HGNC
Primary source
HGNC:HGNC:27022
See related
Ensembl:ENSG00000170044 HPRD:14048; MIM:615915; Vega:OTTHUMG00000159229
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Orthologs
Location:
3q12.3
Exon count:
13
Annotation release Status Assembly Chr Location
108 current GRCh38.p7 (GCF_000001405.33) 3 NC_000003.12 (102385144..102479841)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (101928816..102198685)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101929411 Neighboring gene uncharacterized LOC107986105 Neighboring gene uncharacterized LOC105374016 Neighboring gene uncharacterized LOC107986106 Neighboring gene uncharacterized LOC105374017

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NHGRI GWAS Catalog

Description
Gene-environment interactions and obesity traits among postmenopausal African-American and Hispanic women in the Women's Health Initiative SHARe Study.
NHGRI GWA Catalog
Genome-wide association study of sensory disturbances in the inferior alveolar nerve after bilateral sagittal split ramus osteotomy.
NHGRI GWA Catalog
Transferability of type 2 diabetes implicated loci in multi-ethnic cohorts from Southeast Asia.
NHGRI GWA Catalog

Markers

Homology

Gene Ontology Provided by GOA

Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
zona pellucida-like domain-containing protein 1
Names
ZP domain-containing protein 1
zona pellucida-like domain containing 1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001329788.1NP_001316717.1  zona pellucida-like domain-containing protein 1 isoform 2 precursor

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) contains an alternate exon compared to variant 1. The resulting isoform (2) is shorter at the N-terminus compared to isoform 1.
    Source sequence(s)
    AC069529, AY090780, BC143817
  2. NM_175056.1NP_778226.1  zona pellucida-like domain-containing protein 1 isoform 1 precursor

    See identical proteins and their annotated locations for NP_778226.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes the longer isoform (1).
    Source sequence(s)
    AY090780
    Consensus CDS
    CCDS2947.1
    UniProtKB/Swiss-Prot
    Q8TCW7
    Related
    ENSP00000307801, OTTHUMP00000214467, ENST00000306176, OTTHUMT00000354023
    Conserved Domains (2) summary
    smart00241
    Location:60330
    ZP; Zona pellucida (ZP) domain
    pfam00100
    Location:192330
    Zona_pellucida; Zona pellucida-like domain

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 108 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p7 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p7 Primary Assembly

    Range
    102385144..102479841
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017005703.1XP_016861192.1  

    Related
    ENSP00000420265, OTTHUMP00000214440, ENST00000491959, OTTHUMT00000353984
  2. XM_017005704.1XP_016861193.1  

    Related
    ENSP00000418253, OTTHUMP00000214470, ENST00000466937, OTTHUMT00000354026

Alternate CHM1_1.1

Genomic

  1. NC_018914.2 Alternate CHM1_1.1

    Range
    102117054..102161922
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)