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LMJF_03_0980 putative elongation initiation factor 2 alpha subunit [ Leishmania major strain Friedlin ]

Gene ID: 12981542, updated on 21-Dec-2023

Summary

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Gene symbol
LMJF_03_0980
Gene description
putative elongation initiation factor 2 alpha subunit
Locus tag
LMJF_03_0980
Gene type
protein coding
RNA name
putative elongation initiation factor 2 alpha subunit
RefSeq status
PROVISIONAL
Organism
Leishmania major strain Friedlin (strain: Friedlin)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
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Genomic context

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Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_004916.2 (381260..382558, complement)

Chromosome 3 - NC_004916.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004916.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the kinetoplastid parasite, Leishmania major. Ivens AC, et al. Science, 2005 Jul 15. PMID 16020728, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of eukaryotic 48S preinitiation complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of eukaryotic translation initiation factor 2 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of eukaryotic translation initiation factor 2B complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of multi-eIF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
putative elongation initiation factor 2 alpha subunit
XP_003721774.1
  • previous protein_id=AAM69063.2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004916.2 Reference assembly

    Range
    381260..382558 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003721726.1 → XP_003721774.1  putative elongation initiation factor 2 alpha subunit [Leishmania major strain Friedlin]

    See identical proteins and their annotated locations for XP_003721774.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E9ACP3
    Conserved Domains (3) summary
    COG1093
    Location:140 → 414
    SUI2; Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis]
    cd04452
    Location:147 → 221
    S1_IF2_alpha; S1_IF2_alpha: The alpha subunit of translation Initiation Factor 2, S1-like RNA-binding domain. S1-like RNA-binding domains are found in a wide variety of RNA-associated proteins. Eukaryotic and archaeal Initiation Factor 2 (e- and aIF2, respectively) ...
    pfam07541
    Location:260 → 374
    EIF_2_alpha; Eukaryotic translation initiation factor 2 alpha subunit
Nucleotide Protein
Heading Accession and Version

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