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    Crip1 cysteine-rich protein 1 (intestinal) [ Mus musculus (house mouse) ]

    Gene ID: 12925, updated on 26-Feb-2013
    Official Symbol
    Crip1provided by MGI
    Official Full Name
    cysteine-rich protein 1 (intestinal)provided by MGI
    Primary source
    MGI:88501
    See related
    Ensembl:ENSMUSG00000006360
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    CRHP; CRP1; Crip
    Location :
    12 F1; 12 61.59 cM
    Sequence :
    Chromosome: 12; NC_000078.6 (113152012..113153879)
    See Crip1 in Epigenomics, MapViewer

    Chromosome 12 - NC_000078.6Genomic Context describing neighboring genes Neighboring gene metastasis associated 1 Neighboring gene cysteine rich protein 2 Neighboring gene RIKEN cDNA 4930427A07 gene Neighboring gene transmembrane protein 121

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750.
    2. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068.
    3. Ultraviolet B radiation regulates cysteine-rich protein 1 in human keratinocytes. Latonen L, et al. Photodermatol Photoimmunol Photomed, 2010 Apr. PMID 20415737.
    4. DNA bending by the mammalian high-mobility group protein AT hook 2. Chen B, et al. Biochemistry, 2010 Mar 2. PMID 20108983.
    5. Identification and rational redesign of peptide ligands to CRIP1, a novel biomarker for cancers. Hao J, et al. PLoS Comput Biol, 2008 Aug 1. PMID 18670594.

    See all (31) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction

    Markers

    Genotypes

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    AT DNA binding ISO
    Inferred from Sequence Orthology
    more info
    		  
    AT DNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    DNA binding, bending ISO
    Inferred from Sequence Orthology
    more info
    		  
    DNA binding, bending ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    peptide binding ISO
    Inferred from Sequence Orthology
    more info
    		  
    peptide binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    zinc ion binding ISO
    Inferred from Sequence Orthology
    more info
    		  
    zinc ion binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    apoptotic process ISO
    Inferred from Sequence Orthology
    more info
    		  
    apoptotic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    cellular response to UV-B ISO
    Inferred from Sequence Orthology
    more info
    		  
    cellular response to UV-B ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    cellular response to antibiotic ISO
    Inferred from Sequence Orthology
    more info
    		  
    cellular response to antibiotic ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    response to zinc ion ISO
    Inferred from Sequence Orthology
    more info
    		  
    response to zinc ion ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    cytoplasm ISO
    Inferred from Sequence Orthology
    more info
    		  
    cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Preferred Names
    cysteine-rich protein 1
    Names
    cysteine-rich protein 1
    CRP-1
    cysteine rich intestinal protein
    cysteine-rich intestinal protein

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_007763.3 → NP_031789.1  cysteine-rich protein 1

      Status: VALIDATED

      Source sequence(s)
      AK008269, BX511593, DT908028
      Consensus CDS
      CCDS26205.1
      UniProtKB/Swiss-Prot
      P63254
      Related
      ENSMUSP00000006523, ENSMUST00000006523
      Conserved Domains (1) summary
      cd09478
      Location:4 – 57
      Blast Score: 252
      LIM_CRIP; The LIM domain of Cysteine-Rich Intestinal Protein (CRIP)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 103

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p1 129S1/SvImJ

    Genomic

    1. NT_114985.3 Reference GRCm38.p1 129S1/SvImJ

      Range
      22818..24671
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCm38.p1 129S7/SvEvBrd-Hprt-b-m2

    Genomic

    1. NT_166322.1 Reference GRCm38.p1 129S7/SvEvBrd-Hprt-b-m2

      Range
      14017..15870, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCm38.p1 C57BL/6J

    Genomic

    1. NC_000078.6 Reference GRCm38.p1 C57BL/6J

      Range
      113152012..113153879
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Mm_Celera

    Genomic

    1. AC_000034.1 Alternate Mm_Celera

      Range
      114367853..114369721
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    genomic AAHY01103723.1 (19653..21521) None
    genomic AC161112.5 (121849..123716) None
    genomic AF450245.1 AAM97585.1 129S1/Sv
    genomic CH466549.2 EDL18557.1 mixed
      EDL18558.1 mixed
    genomic CU019611.6 (14016..15869) None
    mRNA AA266159.1 None FVB/N
    mRNA AI323004.1 None
    mRNA AK003075.1 BAB22550.1 C57BL/6J
    mRNA AK008269.1 BAB25566.1 C57BL/6J
    mRNA AK012068.2 BAB28006.1 C57BL/6J
    mRNA AK088267.1 BAC40247.1 NOD
    mRNA AK168305.1 BAE40246.1 DBA/2
    mRNA BC030406.1 None FVB/N
    mRNA BC031922.1 AAH31922.1 FVB/N
    mRNA BC058606.1 None FVB/N-3
    mRNA BC064074.1 AAH64074.1 C57BL/6J
    mRNA BX511593.1 None
    mRNA DT908028.1 None
    mRNA M13018.1 AAA37458.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    P63254.2 GenPept UniProtKB/Swiss-Prot:P63254

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Chemical Information
    Molecular Biology Databases
    Research Materials
    Tools
    Miscellaneous

      Supplemental Content

      Table of contents

      Related information

      • Order cDNA clone
        Order cDNA clone
      • BioProjects
        BioProjects related to a gene
      • CCDS
        Links from Gene to CCDS are established if a gene encodes a protein sequence that is a member of a Consensus CDS (CCDS).
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • EST
        Link to related EST entry
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • GEO Profiles
        Related GEO
      • HomoloGene
        Links between HomoloGene and Gene are provided by the HomoloGene group when a gene is included in a HomoloGene record.
      • Map Viewer
        These links are maintained by the Map Viewer group and are provided when a GeneID is annotated on a map for the same species.
      • Nucleotide
        Link to related Nucleotide entry
      • Probe
        Related Probe entry
      • Protein
        Link to related protein entry
      • PubChem Compound
        PubChem Compounds
      • PubChem Substance
        PubChem Substances
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • RefSeq RNAs
        Link to Nucleotide RefSeq RNAs
      • SNP
        Related SNP records
      • SNP: GeneView
        SNPs linked from GeneView
      • SNP: Genotype
        Gene Genotype Report
      • Taxonomy
        Link to related taxonomy entry
      • UniGene
        Links are provided between Gene and UniGene when both databases calculate links to the same mRNA record (gi).
      • UniSTS
        Related UniSTS records

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