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Spith_0423 ABC transporter [ Spirochaeta thermophila DSM 6578 ]

Gene ID: 12639151, updated on 6-Jul-2014
Gene symbol
Spith_0423
Gene description
ABC transporter
Locus tag
Spith_0423
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Spirochaeta thermophila DSM 6578 (strain: DSM 6578, culture-collection: DSMZ:DSM 6578)
Lineage
Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta
Sequence:
NC_017583.1 (513040..514536)

NC_017583.1Genomic Context describing neighboring genes Neighboring gene PfkB domain-containing protein Neighboring gene transport protein RbsD/FucU Neighboring gene ABC transporter Neighboring gene periplasmic binding protein/LacI transcriptional regulator

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • ABC transporters, organism-specific biosystem (from KEGG)
    ABC transporters, organism-specific biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
  • ABC transporters, conserved biosystem (from KEGG)
    ABC transporters, conserved biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
  • Ribose transport system, organism-specific biosystem (from KEGG)
    Ribose transport system, organism-specific biosystemStructural complex; Environmental information processing; Saccharide and polyol transport system
  • Ribose transport system, conserved biosystem (from KEGG)
    Ribose transport system, conserved biosystemStructural complex; Environmental information processing; Saccharide and polyol transport system
Names
ABC transporter
YP_006044424.1
  • PFAM: ABC transporter~COGs: COG1129 ABC-type sugar transport system ATPase component~InterPro IPR003593:IPR003439~KEGG: chd:Calhy_0678 ABC transporter-like protein~PFAM: ABC transporter-like~SMART: ATPase, AAA+ type, core~SPTR: Monosaccharide ABC transporter ATP-binding protein, CUT2 family

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_017583.1 

    Range
    513040..514536
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_006044424.1 ABC transporter [Spirochaeta thermophila DSM 6578]

    See proteins identical to YP_006044424.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G0GEL9
    Conserved Domains (3) summary
    cd03215
    Location:256476
    Blast Score: 711
    ABC_Carb_Monos_II; Second domain of the ATP-binding cassette component of monosaccharide transport system
    cd03216
    Location:6224
    Blast Score: 654
    ABC_Carb_Monos_I; First domain of the ATP-binding cassette component of monosaccharide transport system
    COG1129
    Location:1497
    Blast Score: 1906
    MglA; ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]