U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

tpiA triosephosphate isomerase [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

Gene ID: 1255608, updated on 4-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
tpiA
Gene description
triosephosphate isomerase
Locus tag
STM4081
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_003197.2 (4290278..4291058, complement)

NC_003197.2Genomic Context describing neighboring genes Neighboring gene putative inner membrane protein Neighboring gene putative ribulose-5-phosphate 3-epimerase Neighboring gene putative periplasmic protein Neighboring gene putative inner membrane protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003197.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Deletion of the gene encoding the glycolytic enzyme triosephosphate isomerase (tpi) alters morphology of Salmonella enterica serovar Typhimurium and decreases fitness in mice. Paterson GK, et al. FEMS Microbiol Lett, 2009 May. PMID 19493007
  2. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. McClelland M, et al. Nature, 2001 Oct 25. PMID 11677609

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The authors provide the first demonstration that tpiA is required for full in vivo fitness of a bacterial pathogen, and that it has a discernable impact on cell morphology.
    Title: Deletion of the gene encoding the glycolytic enzyme triosephosphate isomerase (tpi) alters morphology of Salmonella enterica serovar Typhimurium and decreases fitness in mice.
Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

regulatory

  • Loc: c4291058-4291053 regulatory_class = ribosome_binding_site

General protein information

Go to the top of the page Help
Preferred Names
triosephosphate isomerase
NP_462962.1
  • similar to E. coli triosephosphate isomerase (AAC76901.1); Blastp hit to AAC76901.1 (255 aa), 96% identity in aa 1 - 255

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003197.2 Reference assembly

    Range
    4290278..4291058 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_462962.1 triosephosphate isomerase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

    See identical proteins and their annotated locations for NP_462962.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5T6GGJ8, A0A5T8JVT4, A0A624MWV1, A0A627NN68, A0A631D7L0, A0A6V9XND9, A0A706DIZ7, A0A711UV65, A0A735IPV4, A0A736TDL4, A0A746UVK8, A0A763FX42, A0A764PI54, A0A764QQR6
    Conserved Domains (1) summary
    PRK00042
    Location:2 → 251
    tpiA; triosephosphate isomerase; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8ZKP7.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases