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    aspC aromatic amino acid aminotransferase [ Salmonella enterica subsp. enterica serovar Typhi str. CT18 ]

    Gene ID: 1247430, updated on 18-May-2013
    Gene symbol
    aspC
    Gene description
    aromatic amino acid aminotransferase
    Locus tag
    STY1000
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Salmonella enterica subsp. enterica serovar Typhi str. CT18 (strain: CT18, serovar: Typhi, sub-species: enterica)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella
    Sequence :
    NC_003198.1 (998923..1000113, complement)

    NC_003198.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene outer membrane protein F Neighboring gene asparaginyl-tRNA synthetase

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18. Parkhill J, et al. Nature, 2001 Oct 25. PMID 11677608.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction

    Miscellaneous features

    • Loc: c999387-999346 PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site
    Names
    aromatic amino acid aminotransferase
    NP_455484.1
    • catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003198.1

      Range
      998923..1000113, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_455484.1 aromatic amino acid aminotransferase [Salmonella enterica subsp. enterica serovar Typhi str. CT18]

      Status: PROVISIONAL

      Conserved Domains (2) summary
      cd00609
      Location:29 – 392
      Blast Score: 435
      AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
      PRK09257
      Location:1 – 396
      Blast Score: 1998
      PRK09257; aromatic amino acid aminotransferase; Provisional
    Nucleotide Protein
    Heading Accession and Version
    genomic AL627268.1 CAD05398.1
    genomic AL513382.1 CAD05398.1

    Gene LinkOut

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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