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    rplF 50S ribosomal protein L6 [ Chlamydia muridarum Nigg ]

    Gene ID: 1246168, updated on 15-Sep-2011
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    Summary

    Gene symbol
    rplF
    Gene description
    50S ribosomal protein L6
    Locus tag
    TC0801
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Chlamydia muridarum Nigg (strain: MoPn)
    Lineage
    Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia
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    Genomic context

    Sequence :
    NC_002620.2 (941595..942146, complement)

    NC_002620.2Genomic Context describing neighboring genes Neighboring gene 50S ribosomal protein L15 Neighboring gene 30S ribosomal protein S5 Neighboring gene 50S ribosomal protein L18 Neighboring gene 30S ribosomal protein S8 Neighboring gene 50S ribosomal protein L5

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39. Read TD, et al. Nucleic Acids Res, 2000 Mar 15. PMID 10684935.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

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    General gene information

    Pathways from BioSystems

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    General protein information

    Names
    50S ribosomal protein L6
    NP_297174.1
    • ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002620.2

      Range
      941595..942146, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_297174.1 50S ribosomal protein L6 [Chlamydia muridarum Nigg]

      UniProtKB/Swiss-Prot
      Q9PJM8
      Conserved Domains (2) summary
      pfam00347
      Location:91 – 165
      Blast Score: 204
      Ribosomal_L6; Ribosomal protein L6
      PRK05498
      Location:1 – 172
      Blast Score: 661
      rplF; 50S ribosomal protein L6; Validated
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE002160.2 AAF39604.1
    genomic NZ_ACOV01000004.1 ZP_06194989.1
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    Additional Links

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