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Cacng2 calcium channel, voltage-dependent, gamma subunit 2 [ Mus musculus (house mouse) ]

Gene ID: 12300, updated on 8-May-2016
Official Symbol
Cacng2provided by MGI
Official Full Name
calcium channel, voltage-dependent, gamma subunit 2provided by MGI
Primary source
MGI:MGI:1316660
See related
Ensembl:ENSMUSG00000019146
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
stg; wag; waggler; AW060990; stargazer; stargazin; B230105C07Rik; B930041E13Rik
Orthologs
Location:
15 E1; 15 36.92 cM
Exon count:
5
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 15 NC_000081.6 (77993623..78119280, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (77824053..77949710, complement)

Chromosome 15 - NC_000081.6Genomic Context describing neighboring genes Neighboring gene FAD-dependent oxidoreductase domain containing 2 Neighboring gene eukaryotic translation initiation factor 3, subunit D Neighboring gene uncharacterized LOC102640344 Neighboring gene intraflagellar transport 27

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • MGC123981

Gene Ontology Provided by MGI

Function Evidence Code Pubs
calcium channel activity IEA
Inferred from Electronic Annotation
more info
 
channel regulator activity IBA
Inferred from Biological aspect of Ancestor
more info
 
ionotropic glutamate receptor binding ISO
Inferred from Sequence Orthology
more info
 
voltage-gated calcium channel activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
voltage-gated ion channel activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
calcium ion transport IEA
Inferred from Electronic Annotation
more info
 
ion transport IEA
Inferred from Electronic Annotation
more info
 
membrane depolarization IMP
Inferred from Mutant Phenotype
more info
PubMed 
membrane hyperpolarization IMP
Inferred from Mutant Phenotype
more info
PubMed 
neurological system process IMP
Inferred from Mutant Phenotype
more info
PubMed 
neuromuscular junction development IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity ISO
Inferred from Sequence Orthology
more info
 
regulation of ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
regulation of membrane potential IMP
Inferred from Mutant Phenotype
more info
PubMed 
transmission of nerve impulse IGI
Inferred from Genetic Interaction
more info
PubMed 
transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
AMPA glutamate receptor complex IDA
Inferred from Direct Assay
more info
PubMed 
AMPA glutamate receptor complex ISO
Inferred from Sequence Orthology
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
voltage-gated calcium channel complex IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
voltage-dependent calcium channel gamma-2 subunit
Names
TARP gamma 2
TARP gamma-2
neuronal voltage-gated calcium channel gamma-2 subunit
transmembrane AMPAR regulatory protein gamma-2

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_007583.2NP_031609.1  voltage-dependent calcium channel gamma-2 subunit

    See identical proteins and their annotated locations for NP_031609.1

    Status: VALIDATED

    Source sequence(s)
    AL589650, BC103563
    Consensus CDS
    CCDS27608.1
    UniProtKB/Swiss-Prot
    O88602
    UniProtKB/TrEMBL
    Q3ZB20
    Related
    ENSMUSP00000019290, OTTMUSP00000017670, ENSMUST00000019290, OTTMUST00000039555
    Conserved Domains (1) summary
    pfam00822
    Location:6197
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000081.6 Reference GRCm38.p3 C57BL/6J

    Range
    77993623..78119280 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006520371.1XP_006520434.1  

    Conserved Domains (1) summary
    cl21598
    Location:1174
    Claudin_2; PMP-22/EMP/MP20/Claudin tight junction

Alternate Mm_Celera

Genomic

  1. AC_000037.1 Alternate Mm_Celera

    Range
    79452871..79580282 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)