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Cab39 calcium binding protein 39 [ Mus musculus (house mouse) ]

Gene ID: 12283, updated on 28-May-2016
Official Symbol
Cab39provided by MGI
Official Full Name
calcium binding protein 39provided by MGI
Primary source
MGI:MGI:107438
See related
Ensembl:ENSMUSG00000036707 Vega:OTTMUSG00000021589
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
MO25; C78372; AA408805; AA960512; MO25alpha
Orthologs
Location:
1; 1 C5
Exon count:
11
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 1 NC_000067.6 (85793410..85851577)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (87690022..87748152)

Chromosome 1 - NC_000067.6Genomic Context describing neighboring genes Neighboring gene microRNA 8096 Neighboring gene RIKEN cDNA 9930111H07 gene Neighboring gene integral membrane protein 2C Neighboring gene predicted gene, 32302

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
calcium ion binding ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
kinase binding ISO
Inferred from Sequence Orthology
more info
 
protein kinase activator activity ISO
Inferred from Sequence Orthology
more info
 
protein serine/threonine kinase activator activity ISO
Inferred from Sequence Orthology
more info
 
contributes_to protein serine/threonine kinase activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
activation of protein kinase activity IDA
Inferred from Direct Assay
more info
PubMed 
intracellular signal transduction ISO
Inferred from Sequence Orthology
more info
 
peptidyl-serine phosphorylation ISO
Inferred from Sequence Orthology
more info
 
positive regulation of peptidyl-threonine phosphorylation ISO
Inferred from Sequence Orthology
more info
 
positive regulation of protein serine/threonine kinase activity ISO
Inferred from Sequence Orthology
more info
 
signal transduction by protein phosphorylation ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
cytoplasm IC
Inferred by Curator
more info
PubMed 
extracellular exosome ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
calcium-binding protein 39
Names
calcium binding protein, 39 kDa

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_133781.4NP_598542.3  calcium-binding protein 39

    See identical proteins and their annotated locations for NP_598542.3

    Status: VALIDATED

    Source sequence(s)
    AK005226, AK144665, BB694495, CJ162690
    Consensus CDS
    CCDS15112.1
    UniProtKB/Swiss-Prot
    Q06138
    Related
    ENSMUSP00000108987, OTTMUSP00000024079, ENSMUST00000113360, OTTMUST00000051256
    Conserved Domains (1) summary
    pfam08569
    Location:5335
    Mo25; Mo25-like

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000067.6 Reference GRCm38.p3 C57BL/6J

    Range
    85793410..85851577
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006529090.2XP_006529153.1  

    See identical proteins and their annotated locations for XP_006529153.1

    UniProtKB/Swiss-Prot
    Q06138
    Conserved Domains (1) summary
    pfam08569
    Location:5335
    Mo25; Mo25-like
  2. XM_011247907.1XP_011246209.1  

    See identical proteins and their annotated locations for XP_011246209.1

    UniProtKB/Swiss-Prot
    Q06138
    Conserved Domains (1) summary
    pfam08569
    Location:5335
    Mo25; Mo25-like
  3. XM_006529091.1XP_006529154.1  

    See identical proteins and their annotated locations for XP_006529154.1

    UniProtKB/Swiss-Prot
    Q06138
    Related
    ENSMUSP00000095270, OTTMUSP00000024080, ENSMUST00000097666, OTTMUST00000051257
    Conserved Domains (1) summary
    pfam08569
    Location:5335
    Mo25; Mo25-like

Alternate Mm_Celera

Genomic

  1. AC_000023.1 Alternate Mm_Celera

    Range
    88758053..88816367
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)