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alr alanine racemase [ Treponema pallidum subsp. pallidum str. Chicago ]

Gene ID: 12270436, updated on 6-Jul-2014
Gene symbol
alr
Gene description
alanine racemase
Locus tag
TPChic_0681
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Treponema pallidum subsp. pallidum str. Chicago (strain: Chicago, sub-species: pallidum)
Lineage
Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema
Sequence:
NC_017268.1 (746267..747400, complement)

NC_017268.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene putative glycoprotease GCP Neighboring gene ribosomal RNA large subunit methyltransferase J Neighboring gene octaprenyl-diphosphate synthase

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Names
alanine racemase
YP_005631540.1
  • identified by match to protein family HMM PF00842; match to protein family HMM PF01168; match to protein family HMM TIGR00492

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_017268.1 

    Range
    746267..747400
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_005631540.1 alanine racemase [Treponema pallidum subsp. pallidum str. Chicago]

    See proteins identical to YP_005631540.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D4GBA0
    Conserved Domains (2) summary
    cd00430
    Location:4376
    PLPDE_III_AR; Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase
    COG0787
    Location:1377
    Alr; Alanine racemase [Cell envelope biogenesis, outer membrane]