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    RSc1380 substate-binding periplasmic (PBP) ABC transporter protein [ Ralstonia solanacearum GMI1000 ]

    Gene ID: 1220204, updated on 18-May-2013
    Gene symbol
    RSc1380
    Gene description
    substate-binding periplasmic (PBP) ABC transporter protein
    Locus tag
    RSc1380
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ralstonia solanacearum GMI1000 (strain: GMI1000)
    Lineage
    Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia
    Sequence :
    NC_003295.1 (1471501..1473054)

    NC_003295.1Genomic Context describing neighboring genes Neighboring gene L-asparaginase protein Neighboring gene ABC transporter ATP-binding protein Neighboring gene transmembrane ABC transporter protein Neighboring gene transmembrane ABC transporter protein

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Genome sequence of the plant pathogen Ralstonia solanacearum. Salanoubat M, et al. Nature, 2002 Jan 31. PMID 11823852.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    • ABC transporters, organism-specific biosystem (from KEGG)
      ABC transporters, organism-specific biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
    • ABC transporters, conserved biosystem (from KEGG)
      ABC transporters, conserved biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
    • Glutathione transport system, organism-specific biosystem (from KEGG)
      Glutathione transport system, organism-specific biosystemStructural complex; Environmental information processing; Peptide and nickel transport system
    Names
    substate-binding periplasmic (PBP) ABC transporter protein

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003295.1

      Range
      1471501..1473054
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_519501.1 substate-binding periplasmic (PBP) ABC transporter protein [Ralstonia solanacearum GMI1000]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q8XZL5
      Conserved Domains (2) summary
      cd08499
      Location:34 – 512
      Blast Score: 1765
      PBP2_Ylib_like; The substrate-binding component of an uncharacterized ABC-type peptide import system Ylib contains the type 2 periplasmic binding fold
      PRK15413
      Location:34 – 516
      Blast Score: 1969
      PRK15413; glutathione ABC transporter substrate-binding protein GsiB; Provisional
    Nucleotide Protein
    Heading Accession and Version
    genomic AL646052.1 CAD15082.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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