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    LRRK2 leucine-rich repeat kinase 2 [ Homo sapiens (human) ]

    Gene ID: 120892, updated on 22-May-2013
    Official Symbol
    LRRK2provided by HGNC
    Official Full Name
    leucine-rich repeat kinase 2provided by HGNC
    Primary source
    HGNC:18618
    See related
    Ensembl:ENSG00000188906; MIM:609007; Vega:OTTHUMG00000059742
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    PARK8; RIPK7; ROCO2; AURA17; DARDARIN
    Summary
    This gene is a member of the leucine-rich repeat kinase family and encodes a protein with an ankryin repeat region, a leucine-rich repeat (LRR) domain, a kinase domain, a DFG-like motif, a RAS domain, a GTPase domain, a MLK-like domain, and a WD40 domain. The protein is present largely in the cytoplasm but also associates with the mitochondrial outer membrane. Mutations in this gene have been associated with Parkinson disease-8. [provided by RefSeq, Jul 2008]
    Location :
    12q12
    Sequence :
    Chromosome: 12; NC_000012.11 (40618813..40763087)
    See LRRK2 in Epigenomics, MapViewer

    Chromosome 12 - NC_000012.11Genomic Context describing neighboring genes Neighboring gene chromosome 12 open reading frame 40 Neighboring gene solute carrier family 2 (facilitated glucose transporter), member 13 Neighboring gene ribosomal protein L30 pseudogene 13 Neighboring gene microtubule-associated protein 6 pseudogene Neighboring gene mucin 19, oligomeric Neighboring gene methionyl aminopeptidase 1 pseudogene Neighboring gene contactin 1

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Parkinson disease 8, autosomal dominant

    Summary from GeneReviews: Parkinson Disease Overview Go to GeneReviews

    Disease Characteristics
    Parkinsonism refers to all clinical states characterized by tremor, muscle rigidity, and slowed movement (bradykinesia). Parkinson disease is the primary and most common form of parkinsonism. Psychiatric manifestations, which include depression and visual hallucinations, are common but not uniformly present. Dementia eventually occurs in at least 20% of cases. Generally, individuals with onset before age 20 years are considered to have juvenile-onset Parkinson disease, those with onset before age 50 years are classified as having early-onset Parkinson disease, and those with onset after age 50 years are considered to have late-onset Parkinson disease.
    Diagnosis Testing
    The diagnosis of Parkinson disease is based solely on the clinical findings of tremor, rigidity, and bradykinesia. A good response to levodopa and asymmetric onset of limb involvement are generally regarded as supporting diagnostic features. The cardinal pathologic feature of Parkinson disease is the loss of dopaminergic neurons in the substantia nigra with intracytoplasmic inclusions (Lewy bodies) in the remaining, intact nigral neurons. The genetic cause of some forms of Parkinson disease has been identified. Seven disease genes have been implicated. Mutations in three known genes, SNCA (PARK1), UCHL1 (PARK5), and LRRK2 (PARK8) and one mapped gene (PARK3) result in autosomal dominant Parkinson disease. Mutations in three known genes, PARK2 (PARK2), PARK7 (PARK7), and PINK1 (PARK6), result in autosomal recessive Parkinson disease. Three susceptibility genes have been identified. Molecular genetic testing is clinically available for PARK2 (the gene encoding parkin), PINK1, PARK7, SNCA, and LRRK2.
    Genetic Counseling
    Parkinson disease can be inherited in an autosomal dominant or autosomal recessive manner; however, most cases of Parkinson disease are thought to result from the effects of multiple genes as well as environmental risk factors. Genetic counseling of affected individuals and their family members must be done on a family-by-family basis. The risk to first-degree relatives of a person with Parkinson disease varies from study to study and from country to country. In families with a non-mendelian form of Parkinson disease, first-degree relatives of an affected individual are between 2.7 and 3.5 times more likely to develop Parkinson disease than individuals without a family history of Parkinson disease. Their cumulative lifetime risk of developing Parkinson disease is therefore between 3% and 7%.
    References

    Summary from GeneReviews: LRRK2-Related Parkinson Disease Go to GeneReviews

    Disease Characteristics
    LRRK2-related Parkinson disease (PD) is characterized by features consistent with idiopathic PD: initial motor features of slowly progressive asymmetric tremor at rest and/or bradykinesia, cog-wheel muscle rigidity, postural instability, and gait abnormalities including festination and freezing. Non-motor symptoms in LRRK2-related PD occur with the same frequency as observed in typical idiopathic PD. Onset is generally after age 50 years.
    Diagnosis Testing
    The diagnosis of LRRK2-related PD relies on clinical findings and the identification of a disease-causing mutation in LRRK2.
    Genetic Counseling
    LRRK2-related PD is inherited in an autosomal dominant manner. De novo gene mutations may occur; their frequency is unknown. Each child of an individual with LRRK2-related Parkinson disease has a 50% chance of inheriting the disease-causing mutation. Prenatal diagnosis for pregnancies at increased risk is possible if disease-causing mutation in the family is known.
    References

    NHGRI GWAS Catalog

    show more
    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:125700 BioGRID:106574 ACTA2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:106575 ACTB    BioGRID  PubMed Affinity Capture-MS; Reconstituted Complex 
    BioGRID:125700 BioGRID:131362 ACTBL2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:106586 ACTG1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:106587 ACTG2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:115404 ACTR2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:115403 ACTR3    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:125700 BioGRID:117726 AGO1    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:125700 BioGRID:118041 AGO2    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:125700 BioGRID:115561 AKAP8    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:106710 AKT1    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity 
    BioGRID:125700 BioGRID:120856 ARFGAP1    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity; Co-localization 
    BioGRID:125700 BioGRID:114393 ARHGEF7    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity; Co-localization 
    BioGRID:125700 BioGRID:115402 ARPC1B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:115415 ARPC2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:115400 ARPC4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:115399 ARPC5    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:115876 ATP5L    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:58020 Act5C    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:114905 BAG5    BioGRID  PubMed Two-hybrid 
    BioGRID:125700 BioGRID:107252 CALM1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:107256 CALM2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:107259 CALM3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:107279 CAPZA1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:107280 CAPZA2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:107282 CAPZB    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:107291 CASP8    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:125700 BioGRID:116312 CDC37    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:125700 BioGRID:107433 CDC42    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity; Co-localization 
    BioGRID:125700 BioGRID:107623 CLTC    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:107821 CSE1L    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:125700 BioGRID:198726 Ckm    BioGRID  PubMed Biochemical Activity 
    BioGRID:125700 BioGRID:107982 DAPK1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:125700 BioGRID:107995 DBN1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:109534 DNAJA1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:115370 DNM1L    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:125700 BioGRID:108188 DVL1    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:125700 BioGRID:108189 DVL2    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:125700 BioGRID:108190 DVL3    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:125700 BioGRID:108117 DYNC1H1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:198891 Dpysl2    BioGRID  PubMed Biochemical Activity 
    BioGRID:125700 BioGRID:108237 EEF1A1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:125700 BioGRID:122597 EFHD2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:108293 EIF4EBP1    BioGRID  PubMed Biochemical Activity 
    BioGRID:125700 BioGRID:68577 Ef1alpha100E    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:114302 FADD    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:125700 BioGRID:135104 FLJ45872    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:109030 GNA12    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:115914 GNA13    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:109033 GNAI2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:109272 H3F3A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:113946 HIST1H3A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:130615 HIST2H3B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:109404 HMMR    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:1936241 HSP83_ANOGA    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:109552 HSP90AA1    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western; Biochemical Activity 
    BioGRID:125700 BioGRID:109558 HSP90AB1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:109540 HSPA4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:109544 HSPA8    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:125700 BioGRID:109545 HSPA9    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:109561 HSPD1    BioGRID  PubMed Biochemical Activity 
    BioGRID:125700 BioGRID:58460 Hsp60    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:114353 IQGAP1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:125700 BioGRID:124091 L3MBTL3    BioGRID  PubMed Two-hybrid 
    BioGRID:125700 BioGRID:119559 LIMA1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:110219 LRP6    BioGRID  PubMed Affinity Capture-Western; Co-localization; Two-hybrid 
    BioGRID:125700 BioGRID:122823 LRRK1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:125700 BioGRID:125700 LRRK2    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity; Co-crystal Structure; Two-hybrid 
    BioGRID:125700 BioGRID:110304 MAP1B    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity 
    BioGRID:125700 BioGRID:111592 MAP2K3    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity 
    BioGRID:125700 BioGRID:112315 MAP2K4    BioGRID  PubMed Biochemical Activity 
    BioGRID:125700 BioGRID:111594 MAP2K6    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity 
    BioGRID:125700 BioGRID:111595 MAP2K7    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity 
    BioGRID:125700 BioGRID:110308 MAPT    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity 
    BioGRID:125700 BioGRID:110325 MBP    BioGRID  PubMed Biochemical Activity 
    BioGRID:125700 BioGRID:116804 MDN1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:117389 MPC2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:116776 MPRIP    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:125182 MYL12B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:110721 MYL6    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:115670 MYL9    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:110567 MYO1B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:110725 MYO1C    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:110726 MYO1D    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:125700 BioGRID:110638 MYO1F    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:201336 Mbp    BioGRID  PubMed Biochemical Activity 
    BioGRID:125700 BioGRID:201534 Msn    BioGRID  PubMed Biochemical Activity 
    BioGRID:125700 BioGRID:110846 NFATC2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:125700 BioGRID:534967 NRON    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:125700 BioGRID:111105 PARK2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:125700 BioGRID:111355 PLEC    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:110742 PPP1R12A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:111510 PPP2R1A    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:125700 BioGRID:111576 PRKCZ    BioGRID  PubMed Biochemical Activity 
    BioGRID:125700 BioGRID:111577 PRKDC    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:111689 PSMD11    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:125700 BioGRID:117430 PTPN23    BioGRID  PubMed Two-hybrid 
    BioGRID:125700 BioGRID:111807 RAB5B    BioGRID  PubMed Affinity Capture-Western; Co-localization; Two-hybrid 
    BioGRID:125700 BioGRID:111817 RAC1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:125700 BioGRID:117526 RAI14    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:126498 RALYL    BioGRID  PubMed Two-hybrid 
    BioGRID:125700 BioGRID:106880 RHOA    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:125700 BioGRID:114274 RIPK1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:125700 BioGRID:114300 RIPK2    BioGRID  PubMed Biochemical Activity 
    BioGRID:125700 BioGRID:114752 RPL23    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:112116 RPS8    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:116860 SCFD1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:112352 SH3GL1    BioGRID  PubMed Biochemical Activity 
    BioGRID:125700 BioGRID:112353 SH3GL2    BioGRID  PubMed Biochemical Activity 
    BioGRID:125700 BioGRID:112354 SH3GL3    BioGRID  PubMed Biochemical Activity 
    BioGRID:125700 BioGRID:112506 SNCA    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:125700 BioGRID:114011 STK24    BioGRID  PubMed Biochemical Activity 
    BioGRID:125700 BioGRID:115757 STK25    BioGRID  PubMed Biochemical Activity 
    BioGRID:125700 BioGRID:112664 STK3    BioGRID  PubMed Biochemical Activity 
    BioGRID:125700 BioGRID:120623 STRBP    BioGRID  PubMed Two-hybrid 
    BioGRID:125700 BioGRID:115563 STUB1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:125700 BioGRID:119490 TAOK3    BioGRID  PubMed Biochemical Activity 
    BioGRID:125700 BioGRID:118899 TMOD3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:110040 TNPO1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:125700 BioGRID:113021 TPM1    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:125700 BioGRID:113022 TPM2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:113023 TPM3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:114257 TRADD    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:125700 BioGRID:113038 TRAF2    BioGRID  PubMed Biochemical Activity 
    BioGRID:125700 BioGRID:113603 TUBA1A    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity 
    BioGRID:125700 BioGRID:124259 TUBA1C    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western; Co-localization 
    BioGRID:125700 BioGRID:189906 TUBB    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:125700 BioGRID:128444 TUBB    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western; Co-localization 
    BioGRID:125700 BioGRID:230642 Tubb4b    BioGRID  PubMed Biochemical Activity 
    BioGRID:125700 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:125700 BioGRID:113272 VIM    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:113361 YWHAB    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:113363 YWHAE    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:113364 YWHAG    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:113365 YWHAH    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:116168 YWHAQ    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:125700 BioGRID:113366 YWHAZ    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:62900 betaTub56D    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:125700 BioGRID:625175 futsch    BioGRID  PubMed Biochemical Activity 
    • MAPK signaling pathway, organism-specific biosystem (from WikiPathways)
      MAPK signaling pathway, organism-specific biosystemThe mitogen-activated protein kinase (MAPK) cascade is a highly conserved module that is involved in various cellular functions, including cell proliferation, differentiation and migration. Mammals e...
    • Parkinson's disease, organism-specific biosystem (from KEGG)
      Parkinson's disease, organism-specific biosystemParkinson's disease (PD) is a progressive neurodegenerative movement disorder that results primarily from the death of dopaminergic neurons in the substantia nigra. Mutations in alpha-synuclein, UCHL...
    • Parkinsons Disease Pathway, organism-specific biosystem (from WikiPathways)
      Parkinsons Disease Pathway, organism-specific biosystemMost people with Parkinson's disease have idiopathic Parkinson's disease (having no specific known cause). A small proportion of cases, however, can be attributed to known genetic factors. Mutations ...
    • Wnt Signaling Pathway and Pluripotency, organism-specific biosystem (from WikiPathways)
      Wnt Signaling Pathway and Pluripotency, organism-specific biosystemThis pathway was adapted from several resources and is designed to provide a theoretical frame-work for examining Wnt signaling and interacting components in the context of embryonic stem-cell plurip...

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    GTP binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    GTP-dependent protein kinase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    GTP-dependent protein kinase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    GTPase activator activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    GTPase activity IDA
    Inferred from Direct Assay
    more info
     
    MAP kinase kinase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Rho GTPase binding IPI
    Inferred from Physical Interaction
    more info
     
    identical protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    ion channel binding IPI
    Inferred from Physical Interaction
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    protein homodimerization activity IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    protein kinase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    protein serine/threonine kinase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    tubulin binding IDA
    Inferred from Direct Assay
    more info
     
    Process Evidence Code Pubs
    GTP catabolic process IDA
    Inferred from Direct Assay
    more info
     
    MAPK cascade IDA
    Inferred from Direct Assay
    more info
    PubMed 
    activation of MAPK activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    activation of MAPKK activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    autophagy IEA
    Inferred from Electronic Annotation
    more info
     
    determination of adult lifespan IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    exploration behavior IMP
    Inferred from Mutant Phenotype
    more info
     
    intracellular distribution of mitochondria IMP
    Inferred from Mutant Phenotype
    more info
     
    negative regulation of GTPase activity IDA
    Inferred from Direct Assay
    more info
     
    negative regulation of branching morphogenesis of a nerve IMP
    Inferred from Mutant Phenotype
    more info
     
    negative regulation of dendritic spine morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
     
    negative regulation of neuroblast proliferation IMP
    Inferred from Mutant Phenotype
    more info
     
    negative regulation of neuron maturation IMP
    Inferred from Mutant Phenotype
    more info
     
    neuromuscular junction development IMP
    Inferred from Mutant Phenotype
    more info
     
    neuron death IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    olfactory bulb development IMP
    Inferred from Mutant Phenotype
    more info
     
    peptidyl-serine phosphorylation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    peptidyl-threonine phosphorylation IDA
    Inferred from Direct Assay
    more info
     
    positive regulation of GTPase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    positive regulation of autophagy IMP
    Inferred from Mutant Phenotype
    more info
     
    positive regulation of autophagy ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    positive regulation of cell death IMP
    Inferred from Mutant Phenotype
    more info
     
    positive regulation of dopamine receptor signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
     
    positive regulation of programmed cell death IDA
    Inferred from Direct Assay
    more info
    PubMed 
    positive regulation of proteasomal ubiquitin-dependent protein catabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    positive regulation of protein phosphorylation IMP
    Inferred from Mutant Phenotype
    more info
     
    positive regulation of protein ubiquitination IDA
    Inferred from Direct Assay
    more info
    PubMed 
    protein autophosphorylation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    protein autophosphorylation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    regulation of kidney size ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    regulation of locomotion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    regulation of membrane potential IMP
    Inferred from Mutant Phenotype
    more info
     
    response to oxidative stress IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    small GTPase mediated signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    tangential migration from the subventricular zone to the olfactory bulb IMP
    Inferred from Mutant Phenotype
    more info
     
    Component Evidence Code Pubs
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    dendrite cytoplasm IDA
    Inferred from Direct Assay
    more info
     
    external side of mitochondrial outer membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    membrane raft IEA
    Inferred from Electronic Annotation
    more info
     
    mitochondrion IDA
    Inferred from Direct Assay
    more info
     
    neuron projection IDA
    Inferred from Direct Assay
    more info
     
    neuronal cell body IDA
    Inferred from Direct Assay
    more info
     
    plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    synaptic vesicle IEA
    Inferred from Electronic Annotation
    more info
     
    trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    leucine-rich repeat serine/threonine-protein kinase 2
    Names
    leucine-rich repeat serine/threonine-protein kinase 2
    augmented in rheumatoid arthritis 17
    NP_940980.3

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_011709.1 RefSeqGene

      Range
      5001..149275
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_198578.3NP_940980.3  leucine-rich repeat serine/threonine-protein kinase 2

      Status: REVIEWED

      Source sequence(s)
      AK026776, AK122640, AL832453, AY792511, BC117180, BM285390, CN294292
      Consensus CDS
      CCDS31774.1
      UniProtKB/TrEMBL
      Q17RV3
      UniProtKB/Swiss-Prot
      Q5S007
      Related
      ENSP00000298910, OTTHUMP00000179167, ENST00000298910, OTTHUMT00000277179
      Conserved Domains (9) summary
      COG1100
      Location:13331462
      Blast Score: 147
      COG1100; GTPase SAR1 and related small G proteins [General function prediction only]
      cd00180
      Location:18852132
      Blast Score: 416
      PKc; Catalytic domain of Protein Kinases
      smart00220
      Location:18842128
      Blast Score: 408
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cl15309
      Location:10351239
      Blast Score: 114
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      pfam12796
      Location:713793
      Blast Score: 86
      Ank_2; Ankyrin repeats (3 copies)
      pfam12799
      Location:11081146
      Blast Score: 91
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:11311208
      Blast Score: 99
      LRR_8; Leucine rich repeat
      cd09914
      Location:13341507
      Blast Score: 573
      RocCOR; Ras of complex proteins (Roc) C-terminal of Roc (COR) domain family
      cl02567
      Location:21682387
      Blast Score: 102
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p10 Primary Assembly

    Genomic

    1. NC_000012.11 Reference GRCh37.p10 Primary Assembly

      Range
      40618813..40763087
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000144.1 Alternate HuRef

      Range
      37646624..37790676
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CHM1_1.0

    Genomic

    1. NC_018923.1 Alternate CHM1_1.0

      Range
      40463038..40607270
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

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