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Atp5f1 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1 [ Mus musculus (house mouse) ]

Gene ID: 11950, updated on 8-May-2016
Official Symbol
Atp5f1provided by MGI
Official Full Name
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1provided by MGI
Primary source
MGI:MGI:1100495
See related
Ensembl:ENSMUSG00000000563 Vega:OTTMUSG00000027098
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
C76477
Orthologs
Location:
3 F2.2; 3 46.46 cM
Exon count:
10
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 3 NC_000069.6 (105942698..105960248, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (105745781..105763166, complement)

Chromosome 3 - NC_000069.6Genomic Context describing neighboring genes Neighboring gene transmembrane and immunoglobulin domain containing 3 Neighboring gene adenosine A3 receptor Neighboring gene RIKEN cDNA I830077J02 gene Neighboring gene WD repeat domain 77 Neighboring gene oviductal glycoprotein 1 Neighboring gene primary cilia formation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
contributes_to ATPase activity ISO
Inferred from Sequence Orthology
more info
 
hydrogen ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
contributes_to proton-transporting ATP synthase activity, rotational mechanism IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
ATP synthesis coupled proton transport IBA
Inferred from Biological aspect of Ancestor
more info
 
ion transport IEA
Inferred from Electronic Annotation
more info
 
proton transport IEA
Inferred from Electronic Annotation
more info
 
transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
extracellular exosome ISO
Inferred from Sequence Orthology
more info
 
membrane ISO
Inferred from Sequence Orthology
more info
 
mitochondrial inner membrane IDA
Inferred from Direct Assay
more info
PubMed 
mitochondrial proton-transporting ATP synthase complex ISO
Inferred from Sequence Orthology
more info
 
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IBA
Inferred from Biological aspect of Ancestor
more info
 
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) ISO
Inferred from Sequence Orthology
more info
 
mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
mitochondrion ISO
Inferred from Sequence Orthology
more info
 
myelin sheath IDA
Inferred from Direct Assay
more info
PubMed 
nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
nucleus ISO
Inferred from Sequence Orthology
more info
 
proton-transporting ATP synthase complex, coupling factor F(o) IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
ATP synthase F(0) complex subunit B1, mitochondrial
Names
ATP synthase subunit b, mitochondrial
ATPase subunit b

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001304719.1NP_001291648.1  ATP synthase F(0) complex subunit B1, mitochondrial isoform 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) contains an alternate exon in the 5' region and uses an alternate start codon compared to variant 1. It encodes isoform 2 which has a shorter and distinct N-terminus compared to isoform 1.
    Source sequence(s)
    AK150730, BC087882, BY602471
    UniProtKB/TrEMBL
    Q5I0W0
    Conserved Domains (1) summary
    pfam05405
    Location:58219
    Mt_ATP-synt_B; Mitochondrial ATP synthase B chain precursor (ATP-synt_B)
  2. NM_009725.4NP_033855.2  ATP synthase F(0) complex subunit B1, mitochondrial isoform 1

    See identical proteins and their annotated locations for NP_033855.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes the longer isoform (1).
    Source sequence(s)
    AK019459, BC087882, BY602471
    Consensus CDS
    CCDS17714.1
    UniProtKB/Swiss-Prot
    Q9CQQ7
    UniProtKB/TrEMBL
    Q5I0W0
    Related
    ENSMUSP00000113022, OTTMUSP00000033672, ENSMUST00000118209, OTTMUST00000067024
    Conserved Domains (1) summary
    pfam05405
    Location:83244
    Mt_ATP-synt_B; Mitochondrial ATP synthase B chain precursor (ATP-synt_B)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000069.6 Reference GRCm38.p3 C57BL/6J

    Range
    105942698..105960248 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011239999.1XP_011238301.1  

    Conserved Domains (1) summary
    pfam05405
    Location:58219
    Mt_ATP-synt_B; Mitochondrial ATP synthase B chain precursor (ATP-synt_B)

Alternate Mm_Celera

Genomic

  1. AC_000025.1 Alternate Mm_Celera

    Range
    108133284..108150668 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)