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B3galt6 UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6 [ Mus musculus (house mouse) ]

Gene ID: 117592, updated on 28-May-2016
Official Symbol
B3galt6provided by MGI
Official Full Name
UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6provided by MGI
Primary source
MGI:MGI:2152819
See related
Ensembl:ENSMUSG00000050796 Vega:OTTMUSG00000010988
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
GalTII; BB129894
Orthologs
Location:
4; 4 E2
Exon count:
1
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 4 NC_000070.6 (155989466..155992678, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (155363575..155366787, complement)

Chromosome 4 - NC_000070.6Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2J 2 Neighboring gene family with sequence similarity 132, member A Neighboring gene predicted gene, 42365 Neighboring gene stromal cell derived factor 4 Neighboring gene tumor necrosis factor receptor superfamily, member 4

Markers

Homology

Clone Names

  • MGC91010

Gene Ontology Provided by MGI

Function Evidence Code Pubs
UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
UDP-galactosyltransferase activity ISO
Inferred from Sequence Orthology
more info
 
galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
galactosylxylosylprotein 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity, transferring glycosyl groups IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
glycosaminoglycan biosynthetic process IDA
Inferred from Direct Assay
more info
PubMed 
glycosaminoglycan biosynthetic process ISO
Inferred from Sequence Orthology
more info
 
protein glycosylation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
Golgi medial cisterna IDA
Inferred from Direct Assay
more info
PubMed 
Golgi medial cisterna ISO
Inferred from Sequence Orthology
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
beta-1,3-galactosyltransferase 6
Names
GAG GalTII
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 6
beta-1,3-GalTase 6
beta3Gal-T6
beta3GalT6
galactosyltransferase II
galactosylxylosylprotein 3-beta-galactosyltransferase
NP_536693.1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_080445.4NP_536693.1  beta-1,3-galactosyltransferase 6

    See identical proteins and their annotated locations for NP_536693.1

    Status: VALIDATED

    Source sequence(s)
    AK033608, AK078083, BB660643
    Consensus CDS
    CCDS19053.1
    UniProtKB/Swiss-Prot
    Q91Z92
    Related
    ENSMUSP00000057521, OTTMUSP00000011827, ENSMUST00000052185, OTTMUST00000025776
    Conserved Domains (1) summary
    cl21608
    Location:65256
    Galactosyl_T; Galactosyltransferase

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000070.6 Reference GRCm38.p3 C57BL/6J

    Range
    155989466..155992678 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000026.1 Alternate Mm_Celera

    Range
    158252690..158255872 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)