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    trxC thioredoxin [ Yersinia pestis KIM10+ ]

    Gene ID: 1145866, updated on 8-May-2013
    Gene symbol
    trxC
    Gene description
    thioredoxin
    Locus tag
    y0919
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Yersinia pestis KIM10+ (strain: KIM, substrain: KIM10+, old-name: Yersinia pestis KIM)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia
    Sequence :
    NC_004088.1 (1035512..1035949, complement)

    NC_004088.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene methyltransferase Neighboring gene multidrug resistance protein B

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Genome sequence of Yersinia pestis KIM. Deng W, et al. J Bacteriol, 2002 Aug. PMID 12142430.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    thioredoxin
    NP_668250.1
    • residues 1 to 139 of 145 are 77.69 pct identical to residues 1 to 139 of 139 from E. coli K12 : B2582

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004088.1

      Range
      1035512..1035949, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_668250.1 thioredoxin [Yersinia pestis KIM10+]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q7CK81
      Conserved Domains (3) summary
      PRK10996
      Location:1 – 139
      Blast Score: 747
      PRK10996; thioredoxin 2; Provisional
      cl11777
      Location:1 – 31
      Blast Score: 75
      zinc_ribbon_5; zinc-ribbon domain
      cd02947
      Location:43 – 136
      Blast Score: 312
      TRX_family; TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox ...
    Nucleotide Protein
    Heading Accession and Version
    genomic AE009952.1 AAM84501.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

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