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    CHRNE cholinergic receptor, nicotinic, epsilon (muscle) [ Homo sapiens (human) ]

    Gene ID: 1145, updated on 22-May-2013
    Official Symbol
    CHRNEprovided by HGNC
    Official Full Name
    cholinergic receptor, nicotinic, epsilon (muscle)provided by HGNC
    Primary source
    HGNC:1966
    See related
    Ensembl:ENSG00000108556; HPRD:00008; MIM:100725; Vega:OTTHUMG00000090778
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ACHRE; CMS1D; CMS1E; CMS2A; FCCMS; SCCMS
    Summary
    Acetylcholine receptors at mature mammalian neuromuscular junctions are pentameric protein complexes composed of four subunits in the ratio of two alpha subunits to one beta, one epsilon, and one delta subunit. The acetylcholine receptor changes subunit composition shortly after birth when the epsilon subunit replaces the gamma subunit seen in embryonic receptors. Mutations in the epsilon subunit are associated with congenital myasthenic syndrome. [provided by RefSeq, Sep 2009]
    Location :
    17p13.2
    Sequence :
    Chromosome: 17; NC_000017.10 (4801064..4806369, complement)
    See CHRNE in Epigenomics, MapViewer

    Chromosome 17 - NC_000017.10Genomic Context describing neighboring genes Neighboring gene phospholipase D2 Neighboring gene misshapen-like kinase 1 Neighboring gene ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c pseudogene 1 Neighboring gene chromosome 17 open reading frame 107 Neighboring gene solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 Neighboring gene glycoprotein Ib (platelet), alpha polypeptide

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Myasthenic syndrome, congenital, associated with acetylcholine receptor deficiency

    Summary from GeneReviews: Congenital Myasthenic Syndromes Go to GeneReviews

    Disease Characteristics
    Congenital myasthenic syndromes (designated as CMS throughout this entry) are characterized by fatigable weakness of skeletal muscle (e.g., ocular, bulbar, limb muscles) with onset at or shortly after birth or in early childhood; rarely, symptoms may not manifest until later in childhood. Cardiac and smooth muscle are not involved. Severity and course of disease are highly variable, ranging from minor symptoms to progressive disabling weakness. In some subtypes of CMS, myasthenic symptoms may be mild, but sudden severe exacerbations of weakness or even sudden episodes of respiratory insufficiency may be precipitated by fever, infections, or excitement. Major findings of the neonatal onset subtype include: feeding difficulties; poor suck and cry; choking spells; eyelid ptosis; facial, bulbar, and generalized weakness. In addition arthrogryposis multiplex congenital may be present; respiratory insufficiency with sudden apnea and cyanosis may occur. Later childhood onset subtypes show abnormal muscle fatigability with difficulty in activities such as running or climbing stairs; motor milestones may be delayed; fluctuating eyelid ptosis and fixed or fluctuating extraocular muscle weakness are common presentations.
    Diagnosis Testing
    The diagnosis of CMS is based on clinical findings, a decremental EMG response of the compound muscle action potential (CMAP) on low-frequency (2-3 Hz) stimulation, absence of anti-acetylcholine receptor (AChR) and anti-MuSK antibodies in the serum, and lack of improvement of clinical symptoms with immunosuppressive therapy. Mutations in one of multiple genes encoding proteins expressed at the neuromuscular junction are currently known to be associated with subtypes of CMS, including the genes encoding different subunits of the acetylcholine receptor: CHRNE (epsilonAChR subunit) . CHRNA1 (alphaAChR subunit). CHRNB1 (betaAChR subunit). CHRND (deltaAChR-subunit). AGRN encoding agrin. CHAT encoding choline O-acetyltransferase. COLQ encoding acetylcholinesterase collagenic tail peptide. DOK7 encoding protein Dok-7 . GFPT1 encoding glucosamine--fructose-6-phosphate aminotransferase 1 . MUSK encoding muscle, skeletal receptor tyrosine protein kinase . RAPSN encoding rapsyn (43-kd receptor-associated protein of the synapse). SCN4A encoding the sodium channel protein type 4 subunit alpha. Clinical molecular genetic testing is available for all of these genes.
    Genetic Counseling
    Congenital myasthenic syndromes are inherited in an autosomal recessive, or, less frequently, autosomal dominant manner. In autosomal recessive CMS (AR-CMS), the parents of an affected child are obligate heterozygotes and therefore carry one mutant allele. Heterozygotes (carriers) are asymptomatic. At conception, each sib of an affected individual has a 25% chance of being affected, a 50% chance of being an asymptomatic carrier, and a 25% chance of being unaffected and not a carrier. In autosomal dominant CMS (AD-CMS), some individuals have an affected parent while others have a de novo mutation. The proportion of cases caused by de novo mutations is unknown. Each child of an individual with AD-CMS has a 50% chance of inheriting the mutation. Prenatal testing for pregnancies at increased risk is possible in a clinical laboratory for most subtypes of CMS if the disease-causing mutations in a family are known; prenatal testing for the remaining subtypes may be available through laboratories offering custom prenatal testing.
    References

    Myasthenic syndrome, slow-channel congenital

    Summary from GeneReviews: Congenital Myasthenic Syndromes Go to GeneReviews

    Disease Characteristics
    Congenital myasthenic syndromes (designated as CMS throughout this entry) are characterized by fatigable weakness of skeletal muscle (e.g., ocular, bulbar, limb muscles) with onset at or shortly after birth or in early childhood; rarely, symptoms may not manifest until later in childhood. Cardiac and smooth muscle are not involved. Severity and course of disease are highly variable, ranging from minor symptoms to progressive disabling weakness. In some subtypes of CMS, myasthenic symptoms may be mild, but sudden severe exacerbations of weakness or even sudden episodes of respiratory insufficiency may be precipitated by fever, infections, or excitement. Major findings of the neonatal onset subtype include: feeding difficulties; poor suck and cry; choking spells; eyelid ptosis; facial, bulbar, and generalized weakness. In addition arthrogryposis multiplex congenital may be present; respiratory insufficiency with sudden apnea and cyanosis may occur. Later childhood onset subtypes show abnormal muscle fatigability with difficulty in activities such as running or climbing stairs; motor milestones may be delayed; fluctuating eyelid ptosis and fixed or fluctuating extraocular muscle weakness are common presentations.
    Diagnosis Testing
    The diagnosis of CMS is based on clinical findings, a decremental EMG response of the compound muscle action potential (CMAP) on low-frequency (2-3 Hz) stimulation, absence of anti-acetylcholine receptor (AChR) and anti-MuSK antibodies in the serum, and lack of improvement of clinical symptoms with immunosuppressive therapy. Mutations in one of multiple genes encoding proteins expressed at the neuromuscular junction are currently known to be associated with subtypes of CMS, including the genes encoding different subunits of the acetylcholine receptor: CHRNE (epsilonAChR subunit) . CHRNA1 (alphaAChR subunit). CHRNB1 (betaAChR subunit). CHRND (deltaAChR-subunit). AGRN encoding agrin. CHAT encoding choline O-acetyltransferase. COLQ encoding acetylcholinesterase collagenic tail peptide. DOK7 encoding protein Dok-7 . GFPT1 encoding glucosamine--fructose-6-phosphate aminotransferase 1 . MUSK encoding muscle, skeletal receptor tyrosine protein kinase . RAPSN encoding rapsyn (43-kd receptor-associated protein of the synapse). SCN4A encoding the sodium channel protein type 4 subunit alpha. Clinical molecular genetic testing is available for all of these genes.
    Genetic Counseling
    Congenital myasthenic syndromes are inherited in an autosomal recessive, or, less frequently, autosomal dominant manner. In autosomal recessive CMS (AR-CMS), the parents of an affected child are obligate heterozygotes and therefore carry one mutant allele. Heterozygotes (carriers) are asymptomatic. At conception, each sib of an affected individual has a 25% chance of being affected, a 50% chance of being an asymptomatic carrier, and a 25% chance of being unaffected and not a carrier. In autosomal dominant CMS (AD-CMS), some individuals have an affected parent while others have a de novo mutation. The proportion of cases caused by de novo mutations is unknown. Each child of an individual with AD-CMS has a 50% chance of inheriting the mutation. Prenatal testing for pregnancies at increased risk is possible in a clinical laboratory for most subtypes of CMS if the disease-causing mutations in a family are known; prenatal testing for the remaining subtypes may be available through laboratories offering custom prenatal testing.
    References
    Products Interactant Other Gene Complex Source Pubs Description
    Q04844 P02708 CHRNA1    HPRD  PubMed  
    BioGRID:107567 BioGRID:107556 CHRNA1    BioGRID  PubMed Reconstituted Complex 

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    acetylcholine receptor activity TAS
    Traceable Author Statement
    more info
    PubMed 
    acetylcholine-activated cation-selective channel activity IEA
    Inferred from Electronic Annotation
    more info
     
    cation transmembrane transporter activity TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    cation transport TAS
    Traceable Author Statement
    more info
    PubMed 
    muscle contraction TAS
    Traceable Author Statement
    more info
    PubMed 
    regulation of membrane potential IEA
    Inferred from Electronic Annotation
    more info
     
    signal transduction TAS
    Traceable Author Statement
    more info
    PubMed 
    synaptic transmission TAS
    Traceable Author Statement
    more info
     
    synaptic transmission, cholinergic TAS
    Traceable Author Statement
    more info
    PubMed 
    transport TAS
    Traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    acetylcholine-gated channel complex TAS
    Traceable Author Statement
    more info
    PubMed 
    cell junction IEA
    Inferred from Electronic Annotation
    more info
     
    integral to plasma membrane TAS
    Traceable Author Statement
    more info
    PubMed 
    plasma membrane TAS
    Traceable Author Statement
    more info
     
    postsynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    acetylcholine receptor subunit epsilon
    Names
    acetylcholine receptor subunit epsilon
    AchR epsilon subunit
    acetylcholine receptor, nicotinic, epsilon (muscle)
    cholinergic receptor, nicotinic, epsilon polypeptide

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_008029.2 RefSeqGene

      Range
      5002..10307
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_000080.3NP_000071.1  acetylcholine receptor subunit epsilon precursor

      Status: REVIEWED

      Source sequence(s)
      AC233723, X66403
      Consensus CDS
      CCDS11058.1
      UniProtKB/Swiss-Prot
      Q04844
      Related
      ENSP00000293780, OTTHUMP00000216307, ENST00000293780, OTTHUMT00000207560
      Conserved Domains (2) summary
      pfam02931
      Location:24240
      Blast Score: 649
      Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain
      pfam02932
      Location:247474
      Blast Score: 503
      Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p10 Primary Assembly

    Genomic

    1. NC_000017.10 Reference GRCh37.p10 Primary Assembly

      Range
      4801064..4806369, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000149.1 Alternate HuRef

      Range
      4689154..4694504, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CHM1_1.0

    Genomic

    1. NC_018928.1 Alternate CHM1_1.0

      Range
      4788228..4793536, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

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