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Apoc4 apolipoprotein C-IV [ Mus musculus (house mouse) ]

Gene ID: 11425, updated on 28-May-2016
Official Symbol
Apoc4provided by MGI
Official Full Name
apolipoprotein C-IVprovided by MGI
Primary source
MGI:MGI:87878
See related
Ensembl:ENSMUSG00000074336 Vega:OTTMUSG00000032973
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Acl; apo-CIV; apoC-IV
Orthologs
Location:
7 A3; 7 9.94 cM
Exon count:
3
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 7 NC_000073.6 (19678084..19681460, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (20263443..20266765, complement)

Chromosome 7 - NC_000073.6Genomic Context describing neighboring genes Neighboring gene cleft lip and palate associated transmembrane protein 1 Neighboring gene apolipoprotein C-II Neighboring gene apolipoprotein C-I Neighboring gene apolipoprotein E

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

Readthrough Apoc4-apoc2

Readthrough gene: Apoc4-apoc2, Included gene: Apoc2

Homology

Clone Names

  • MGC117889

Gene Ontology Provided by MGI

Function Evidence Code Pubs
lipid transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
lipid transport IEA
Inferred from Electronic Annotation
more info
 
positive regulation of sequestering of triglyceride IBA
Inferred from Biological aspect of Ancestor
more info
 
positive regulation of sequestering of triglyceride ISO
Inferred from Sequence Orthology
more info
 
transport IEA
Inferred from Electronic Annotation
more info
 
triglyceride homeostasis IBA
Inferred from Biological aspect of Ancestor
more info
 
triglyceride homeostasis ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
extracellular region IEA
Inferred from Electronic Annotation
more info
 
high-density lipoprotein particle IBA
Inferred from Biological aspect of Ancestor
more info
 
high-density lipoprotein particle ISO
Inferred from Sequence Orthology
more info
 
very-low-density lipoprotein particle IDA
Inferred from Direct Assay
more info
PubMed 
very-low-density lipoprotein particle ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
apolipoprotein C-IV
Names
apolipoprotein C2-linked
apolipoprotein C4

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_007385.3NP_031411.1  apolipoprotein C-IV precursor

    See identical proteins and their annotated locations for NP_031411.1

    Status: VALIDATED

    Source sequence(s)
    AC149282, BB872041, BC100593
    Consensus CDS
    CCDS20910.1
    UniProtKB/Swiss-Prot
    Q61268
    Related
    ENSMUSP00000003071, OTTMUSP00000044048, ENSMUST00000003071, OTTMUST00000082220
    Conserved Domains (1) summary
    pfam15119
    Location:29122
    APOC4; Apolipoprotein C4

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000073.6 Reference GRCm38.p3 C57BL/6J

    Range
    19678084..19681460 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000029.1 Alternate Mm_Celera

    Range
    17084167..17087544 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)