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VAMP2 vesicle associated membrane protein 2 [ Eumetopias jubatus (Steller sea lion) ]

Gene ID: 114225431, updated on 15-Mar-2024

Summary

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Gene symbol
VAMP2
Gene description
vesicle associated membrane protein 2
See related
EnsemblRapid:ENSEJUG00000014077
Gene type
protein coding
RefSeq status
MODEL
Organism
Eumetopias jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Eumetopias
Orthologs
human mouse all
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Genomic context

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See VAMP2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM402803v1 (GCF_004028035.1) Unplaced Scaffold NW_020998736.1 (3075866..3078441)

NW_020998736.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114225394 Neighboring gene transmembrane protein 107 Neighboring gene U8 small nucleolar RNA Neighboring gene period circadian regulator 1 Neighboring gene uncharacterized LOC114225307 Neighboring gene transfer RNA threonine (anticodon AGU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020998736 Unplaced Scaffold Reference ASM402803v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables syntaxin-1 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SNARE complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vesicle-associated membrane protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eumetopias jubatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM402803v1 Primary Assembly

Genomic

  1. NW_020998736.1 Reference ASM402803v1 Primary Assembly

    Range
    3075866..3078441
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028125129.1 → XP_027980930.1  vesicle-associated membrane protein 2

    Related
    ENSEJUP00000019087.1, ENSEJUT00000021335.1
    Conserved Domains (1) summary
    cd15870
    Location:30 → 92
    R-SNARE_VAMP2; SNARE motif of VAMP2
Nucleotide Protein
Heading Accession and Version

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