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MRTFA myocardin related transcription factor A [ Eumetopias jubatus (Steller sea lion) ]

Gene ID: 114218454, updated on 15-Mar-2024

Summary

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Gene symbol
MRTFA
Gene description
myocardin related transcription factor A
See related
EnsemblRapid:ENSEJUG00000014862
Gene type
protein coding
RefSeq status
MODEL
Organism
Eumetopias jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Eumetopias
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current ASM402803v1 (GCF_004028035.1) Unplaced Scaffold NW_020998681.1 (8187162..8379918)

NW_020998681.1Genomic Context describing neighboring genes Neighboring gene nascent polypeptide-associated complex subunit alpha pseudogene Neighboring gene melanin concentrating hormone receptor 1 Neighboring gene small G protein signaling modulator 3 Neighboring gene adenylosuccinate lyase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020998681 Unplaced Scaffold Reference ASM402803v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in smooth muscle cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myocardin-related transcription factor A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eumetopias jubatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM402803v1 Primary Assembly

Genomic

  1. NW_020998681.1 Reference ASM402803v1 Primary Assembly

    Range
    8187162..8379918
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028115594.1 → XP_027971395.1  myocardin-related transcription factor A isoform X9

    Conserved Domains (4) summary
    smart00707
    Location:24 → 49
    RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
    PHA03247
    Location:554 → 805
    PHA03247; large tegument protein UL36; Provisional
    PRK12678
    Location:327 → 425
    PRK12678; transcription termination factor Rho; Provisional
    pfam02037
    Location:344 → 374
    SAP; SAP domain

  2. XM_028115588.1 → XP_027971389.1  myocardin-related transcription factor A isoform X3

    Related
    ENSEJUP00000020229.1, ENSEJUT00000022598.1
    Conserved Domains (4) summary
    smart00707
    Location:157 → 182
    RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
    PHA03247
    Location:687 → 938
    PHA03247; large tegument protein UL36; Provisional
    PRK12678
    Location:460 → 558
    PRK12678; transcription termination factor Rho; Provisional
    pfam02037
    Location:477 → 507
    SAP; SAP domain

  3. XM_028115589.1 → XP_027971390.1  myocardin-related transcription factor A isoform X4

    Related
    ENSEJUP00000020240.1, ENSEJUT00000022608.1
    Conserved Domains (4) summary
    smart00707
    Location:157 → 182
    RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
    PHA03247
    Location:687 → 935
    PHA03247; large tegument protein UL36; Provisional
    PRK12678
    Location:460 → 558
    PRK12678; transcription termination factor Rho; Provisional
    pfam02037
    Location:477 → 507
    SAP; SAP domain

  4. XM_028115592.1 → XP_027971393.1  myocardin-related transcription factor A isoform X7

    Related
    ENSEJUP00000020248.1, ENSEJUT00000022618.1
    Conserved Domains (4) summary
    smart00707
    Location:59 → 84
    RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
    PHA03247
    Location:589 → 840
    PHA03247; large tegument protein UL36; Provisional
    PRK12678
    Location:362 → 460
    PRK12678; transcription termination factor Rho; Provisional
    pfam02037
    Location:379 → 409
    SAP; SAP domain

  5. XM_028115591.1 → XP_027971392.1  myocardin-related transcription factor A isoform X6

    Conserved Domains (4) summary
    smart00707
    Location:72 → 97
    RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
    PHA03247
    Location:602 → 853
    PHA03247; large tegument protein UL36; Provisional
    PRK12678
    Location:375 → 473
    PRK12678; transcription termination factor Rho; Provisional
    pfam02037
    Location:392 → 422
    SAP; SAP domain

  6. XM_028115590.1 → XP_027971391.1  myocardin-related transcription factor A isoform X5

    Related
    ENSEJUP00000020262.1, ENSEJUT00000022632.1
    Conserved Domains (4) summary
    smart00707
    Location:87 → 112
    RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
    PHA03247
    Location:617 → 868
    PHA03247; large tegument protein UL36; Provisional
    PRK12678
    Location:390 → 488
    PRK12678; transcription termination factor Rho; Provisional
    pfam02037
    Location:407 → 437
    SAP; SAP domain

  7. XM_028115593.1 → XP_027971394.1  myocardin-related transcription factor A isoform X8

    Conserved Domains (4) summary
    smart00707
    Location:52 → 77
    RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
    PHA03247
    Location:582 → 833
    PHA03247; large tegument protein UL36; Provisional
    PRK12678
    Location:355 → 453
    PRK12678; transcription termination factor Rho; Provisional
    pfam02037
    Location:372 → 402
    SAP; SAP domain

  8. XM_028115585.1 → XP_027971386.1  myocardin-related transcription factor A isoform X1

    Conserved Domains (4) summary
    smart00707
    Location:177 → 202
    RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
    PHA03247
    Location:707 → 958
    PHA03247; large tegument protein UL36; Provisional
    pfam04394
    Location:671 → 706
    DUF536; Protein of unknown function, DUF536
    pfam02037
    Location:497 → 527
    SAP; SAP domain

  9. XM_028115586.1 → XP_027971387.1  myocardin-related transcription factor A isoform X2

    Conserved Domains (4) summary
    smart00707
    Location:177 → 202
    RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
    PHA03247
    Location:707 → 955
    PHA03247; large tegument protein UL36; Provisional
    pfam04394
    Location:671 → 706
    DUF536; Protein of unknown function, DUF536
    pfam02037
    Location:497 → 527
    SAP; SAP domain
Nucleotide Protein
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