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Ercc4 ERCC excision repair 4, endonuclease catalytic subunit [ Marmota flaviventris (yellow-bellied marmot) ]

Gene ID: 114097104, updated on 15-Mar-2024

Summary

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Gene symbol
Ercc4
Gene description
ERCC excision repair 4, endonuclease catalytic subunit
See related
EnsemblRapid:ENSMFVG00000010655
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota flaviventris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Orthologs
human mouse all
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Genomic context

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See Ercc4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current GSC_YBM_2.0 (GCF_003676075.2) Unplaced Scaffold NW_023144699.1 (4668473..4696940, complement)
100 previous assembly ASM367607v1 (GCF_003676075.1) Unplaced Scaffold NW_020963150.1 (4668398..4696865, complement)

NW_023144699.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117794823 Neighboring gene transfer RNA threonine (anticodon CGU) Neighboring gene myocardin related transcription factor B Neighboring gene sperm motility kinase 2B-like Neighboring gene small nucleolar RNA SNORA26

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA endodeoxyribonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair involved in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in resolution of meiotic recombination intermediates IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleotide-excision repair factor 1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA repair endonuclease XPF

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota flaviventris Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GSC_YBM_2.0 Primary Assembly

Genomic

  1. NW_023144699.1 Reference GSC_YBM_2.0 Primary Assembly

    Range
    4668473..4696940 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027940940.1 → XP_027796741.1  DNA repair endonuclease XPF

    Related
    ENSMFVP00000017345.1, ENSMFVT00000019283.1
Nucleotide Protein
Heading Accession and Version

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