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RIGI RNA sensor RIG-I [ Empidonax traillii (willow flycatcher) ]

Gene ID: 114057888, updated on 15-Mar-2024

Summary

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Gene symbol
RIGI
Gene description
RNA sensor RIG-I
Gene type
protein coding
RefSeq status
MODEL
Organism
Empidonax traillii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Tyrannidae; Empidonax
Also known as
DDX58
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current ASM303162v1 (GCF_003031625.1) Unplaced Scaffold NW_020955345.1 (139936..161661)

NW_020955345.1Genomic Context describing neighboring genes Neighboring gene cyclin-dependent kinase 4 inhibitor B-like Neighboring gene cyclin-dependent kinase 4 inhibitor B-like Neighboring gene aconitase 1 Neighboring gene diacylglycerol kinase theta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020955345 Unplaced Scaffold Reference ASM303162v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ATP-dependent RNA helicase DDX58
Names
DExD/H-box helicase 58

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Empidonax traillii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM303162v1

Genomic

  1. NW_020955345.1 Reference ASM303162v1

    Range
    139936..161661
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027884684.1 → XP_027740485.1  probable ATP-dependent RNA helicase DDX58

Nucleotide Protein
Heading Accession and Version

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