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COL23A1 collagen type XXIII alpha 1 chain [ Chelonia mydas (Green sea turtle) ]

Gene ID: 114020295, updated on 15-Mar-2024

Summary

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Gene symbol
COL23A1
Gene description
collagen type XXIII alpha 1 chain
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
32
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 8 NC_057854.1 (8911344..9263081)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 8 NC_051248.1 (8911221..9261363)

Chromosome 8 - NC_057854.1Genomic Context describing neighboring genes Neighboring gene RasGEF domain family member 1C Neighboring gene CDC like kinase 4 Neighboring gene 5-phosphohydroxy-L-lysine phospho-lyase Neighboring gene heterogeneous nuclear ribonucleoprotein A/B Neighboring gene NME/NM23 family member 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
collagen alpha-1(XXIII) chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057854.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    8911344..9263081
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043552667.1 → XP_043408602.1  collagen alpha-1(XXIII) chain isoform X2

  2. XM_043552666.1 → XP_043408601.1  collagen alpha-1(XXIII) chain isoform X1

  3. XM_043552668.1 → XP_043408603.1  collagen alpha-1(XXIII) chain isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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