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SP9 Sp9 transcription factor [ Neopelma chrysocephalum (saffron-crested tyrant-manakin) ]

Gene ID: 113965312, updated on 15-Mar-2024

Summary

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Gene symbol
SP9
Gene description
Sp9 transcription factor
Gene type
protein coding
RefSeq status
MODEL
Organism
Neopelma chrysocephalum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Pipridae; Neopelma
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM398488v2 (GCF_003984885.1) Unplaced Scaffold NW_020897703.1 (13079614..13082193, complement)

NW_020897703.1Genomic Context describing neighboring genes Neighboring gene secernin 3 Neighboring gene corepressor interacting with RBPJ, CIR1 Neighboring gene Obg like ATPase 1 Neighboring gene uncharacterized LOC113965090

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020897703 Unplaced Scaffold Reference ASM398488v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor Sp9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neopelma chrysocephalum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM398488v2

Genomic

  1. NW_020897703.1 Reference ASM398488v2

    Range
    13079614..13082193 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027678525.1 → XP_027534326.1  transcription factor Sp9 isoform X1

  2. XM_027678526.1 → XP_027534327.1  transcription factor Sp9 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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