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RBL2 RB transcriptional corepressor like 2 [ Zalophus californianus (California sea lion) ]

Gene ID: 113935342, updated on 15-Mar-2024

Summary

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Gene symbol
RBL2
Gene description
RB transcriptional corepressor like 2
See related
EnsemblRapid:ENSZCAG00025021535
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
23
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 17 NC_045611.1 (30304269..30353650, complement)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020874921.1 (29160252..29209944)

Chromosome 17 - NC_045611.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113936757 Neighboring gene AKT interacting protein Neighboring gene 60S ribosomal protein L5-like Neighboring gene chromodomain helicase DNA binding protein 9 Neighboring gene uncharacterized LOC113935349

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of G1/S transition of mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
retinoblastoma-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045611.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    30304269..30353650 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027617206.2 → XP_027473007.2  retinoblastoma-like protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A6J2F1L0
    Related
    ENSZCAP00025034061.1, ENSZCAT00025038480.1
    Conserved Domains (5) summary
    pfam01858
    Location:417 → 608
    RB_A; Retinoblastoma-associated protein A domain
    pfam11934
    Location:104 → 236
    DUF3452; Domain of unknown function (DUF3452)
    cd00043
    Location:47 → 134
    CYCLIN_SF; Cyclin box fold superfamily
    cl40454
    Location:834 → 999
    CYCLIN_SF; Cyclin box fold superfamily
    cl41773
    Location:691 → 837
    SP1-4_N; N-terminal domain of transcription factor Specificity Proteins (SP) 1-4

  2. XM_027617205.2 → XP_027473006.2  retinoblastoma-like protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A6J2EXL7
    Related
    ENSZCAP00025034010.1, ENSZCAT00025038413.1
    Conserved Domains (5) summary
    pfam01858
    Location:417 → 608
    RB_A; Retinoblastoma-associated protein A domain
    pfam11934
    Location:104 → 236
    DUF3452; Domain of unknown function (DUF3452)
    cd00043
    Location:47 → 134
    CYCLIN_SF; Cyclin box fold superfamily
    cd20606
    Location:834 → 1023
    CYCLIN_RBL2; cyclin box found in retinoblastoma-like protein 2 (RBL2) and similar proteins
    cl41773
    Location:691 → 837
    SP1-4_N; N-terminal domain of transcription factor Specificity Proteins (SP) 1-4

  3. XM_027617207.2 → XP_027473008.2  retinoblastoma-like protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A6J2F5K2
    Conserved Domains (4) summary
    pfam01858
    Location:286 → 477
    RB_A; Retinoblastoma-associated protein A domain
    pfam11934
    Location:1 → 105
    DUF3452; Domain of unknown function (DUF3452)
    cd20606
    Location:703 → 892
    CYCLIN_RBL2; cyclin box found in retinoblastoma-like protein 2 (RBL2) and similar proteins
    cl41773
    Location:560 → 706
    SP1-4_N; N-terminal domain of transcription factor Specificity Proteins (SP) 1-4
Nucleotide Protein
Heading Accession and Version

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