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FER FER tyrosine kinase [ Zalophus californianus (California sea lion) ]

Gene ID: 113929410, updated on 15-Mar-2024

Summary

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Gene symbol
FER
Gene description
FER tyrosine kinase
See related
EnsemblRapid:ENSZCAG00025007482
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
23
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 5 NC_045599.1 (84824587..85273928)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020874474.1 (68243192..68689963, complement)

Chromosome 5 - NC_045599.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113928447 Neighboring gene F-box and leucine rich repeat protein 17 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene small nuclear ribonucleoprotein F-like Neighboring gene uncharacterized LOC113928817 Neighboring gene praja ring finger ubiquitin ligase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables non-membrane spanning protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Fc-epsilon receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-tyrosine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mast cell degranulation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine-protein kinase Fer

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045599.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    84824587..85273928
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027606296.2 → XP_027462097.2  tyrosine-protein kinase Fer isoform X1

    UniProtKB/TrEMBL
    A0A6J2E0C0
    Related
    ENSZCAP00025011460.1, ENSZCAT00025013059.1
    Conserved Domains (3) summary
    cd07686
    Location:5 → 238
    F-BAR_Fer; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Fer (Fes related) tyrosine kinase
    cd10361
    Location:453 → 538
    SH2_Fps_family; Src homology 2 (SH2) domain found in feline sarcoma, Fujinami poultry sarcoma, and fes-related (Fes/Fps/Fer) proteins
    cl21453
    Location:566 → 816
    PKc_like; Protein Kinases, catalytic domain

  2. XM_027606298.2 → XP_027462099.2  tyrosine-protein kinase Fer isoform X1

    UniProtKB/TrEMBL
    A0A6J2E0C0
    Related
    ENSZCAP00025011487.1, ENSZCAT00025013089.1
    Conserved Domains (3) summary
    cd07686
    Location:5 → 238
    F-BAR_Fer; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Fer (Fes related) tyrosine kinase
    cd10361
    Location:453 → 538
    SH2_Fps_family; Src homology 2 (SH2) domain found in feline sarcoma, Fujinami poultry sarcoma, and fes-related (Fes/Fps/Fer) proteins
    cl21453
    Location:566 → 816
    PKc_like; Protein Kinases, catalytic domain

  3. XM_027606297.2 → XP_027462098.2  tyrosine-protein kinase Fer isoform X1

    UniProtKB/TrEMBL
    A0A6J2E0C0
    Conserved Domains (3) summary
    cd07686
    Location:5 → 238
    F-BAR_Fer; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Fer (Fes related) tyrosine kinase
    cd10361
    Location:453 → 538
    SH2_Fps_family; Src homology 2 (SH2) domain found in feline sarcoma, Fujinami poultry sarcoma, and fes-related (Fes/Fps/Fer) proteins
    cl21453
    Location:566 → 816
    PKc_like; Protein Kinases, catalytic domain

  4. XM_027606295.2 → XP_027462096.2  tyrosine-protein kinase Fer isoform X1

    UniProtKB/TrEMBL
    A0A6J2E0C0
    Conserved Domains (3) summary
    cd07686
    Location:5 → 238
    F-BAR_Fer; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Fer (Fes related) tyrosine kinase
    cd10361
    Location:453 → 538
    SH2_Fps_family; Src homology 2 (SH2) domain found in feline sarcoma, Fujinami poultry sarcoma, and fes-related (Fes/Fps/Fer) proteins
    cl21453
    Location:566 → 816
    PKc_like; Protein Kinases, catalytic domain

  5. XM_027606299.2 → XP_027462100.2  tyrosine-protein kinase Fer isoform X2

    UniProtKB/TrEMBL
    A0A6J2DZU7
    Related
    ENSZCAP00025011494.1, ENSZCAT00025013096.1
    Conserved Domains (3) summary
    cd07686
    Location:5 → 238
    F-BAR_Fer; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Fer (Fes related) tyrosine kinase
    cd10361
    Location:453 → 538
    SH2_Fps_family; Src homology 2 (SH2) domain found in feline sarcoma, Fujinami poultry sarcoma, and fes-related (Fes/Fps/Fer) proteins
    cl21453
    Location:552 → 797
    PKc_like; Protein Kinases, catalytic domain

  6. XM_027606300.2 → XP_027462101.2  tyrosine-protein kinase Fer isoform X3

    UniProtKB/TrEMBL
    A0A6J2E1W7
    Conserved Domains (3) summary
    cd10361
    Location:278 → 363
    SH2_Fps_family; Src homology 2 (SH2) domain found in feline sarcoma, Fujinami poultry sarcoma, and fes-related (Fes/Fps/Fer) proteins
    cl12013
    Location:1 → 63
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
    cl21453
    Location:391 → 641
    PKc_like; Protein Kinases, catalytic domain

  7. XM_027606301.2 → XP_027462102.2  tyrosine-protein kinase Fer isoform X3

    UniProtKB/TrEMBL
    A0A6J2E1W7
    Conserved Domains (3) summary
    cd10361
    Location:278 → 363
    SH2_Fps_family; Src homology 2 (SH2) domain found in feline sarcoma, Fujinami poultry sarcoma, and fes-related (Fes/Fps/Fer) proteins
    cl12013
    Location:1 → 63
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
    cl21453
    Location:391 → 641
    PKc_like; Protein Kinases, catalytic domain

RNA

  1. XR_003522180.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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