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SOCS2 suppressor of cytokine signaling 2 [ Bos indicus x Bos taurus (hybrid cattle) ]

Gene ID: 113893275, updated on 15-Mar-2024

Summary

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Gene symbol
SOCS2
Gene description
suppressor of cytokine signaling 2
See related
Ensembl:ENSBIXG00005011463
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus x Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See SOCS2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
100 current UOA_Brahman_1 (GCF_003369695.1) 5 NC_040080.1 (96887001..96892902, complement)

Chromosome 5 - NC_040080.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113893272 Neighboring gene chromobox protein homolog 3 pseudogene Neighboring gene CASP2 and RIPK1 domain containing adaptor with death domain Neighboring gene mitochondrial ribosomal protein L42 Neighboring gene hsc70-interacting protein pseudogene Neighboring gene ubiquitin conjugating enzyme E2 N

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040080.1 Chromosome 5 Reference UOA_Brahman_1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-phosphatidylinositol-3-kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of phosphatidylinositol 3-kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
suppressor of cytokine signaling 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus x Bos taurus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UOA_Brahman_1

Genomic

  1. NC_040080.1 Reference UOA_Brahman_1

    Range
    96887001..96892902 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027543159.1 → XP_027398960.1  suppressor of cytokine signaling 2

    UniProtKB/TrEMBL
    A0A4W2FJY6, A0A4W2FKV5, A0A4W2HLU1

  2. XM_027543157.1 → XP_027398958.1  suppressor of cytokine signaling 2

    UniProtKB/TrEMBL
    A0A4W2FJY6, A0A4W2FKV5, A0A4W2HLU1
    Related
    ENSBIXP00005005712.1, ENSBIXT00005005821.1

  3. XM_027543156.1 → XP_027398957.1  suppressor of cytokine signaling 2

    UniProtKB/TrEMBL
    A0A4W2FJY6, A0A4W2FKV5, A0A4W2HLU1

  4. XM_027543158.1 → XP_027398959.1  suppressor of cytokine signaling 2

    UniProtKB/TrEMBL
    A0A4W2FJY6, A0A4W2FKV5, A0A4W2HLU1
Nucleotide Protein
Heading Accession and Version

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