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CNTN3 contactin 3 [ Bos indicus x Bos taurus (hybrid cattle) ]

Gene ID: 113880432, updated on 15-Mar-2024

Summary

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Gene symbol
CNTN3
Gene description
contactin 3
See related
Ensembl:ENSBIXG00005031394
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus x Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22
Exon count:
25
Annotation release Status Assembly Chr Location
100 current UOA_Brahman_1 (GCF_003369695.1) 22 NC_040097.1 (33392471..33791715, complement)

Chromosome 22 - NC_040097.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 4 regulatory subunit 2 Neighboring gene PDZ domain containing ring finger 3 Neighboring gene uncharacterized LOC113880932 Neighboring gene U6 spliceosomal RNA Neighboring gene cell adhesion molecule L1 like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040097.1 Chromosome 22 Reference UOA_Brahman_1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell-cell adhesion mediator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
contactin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus x Bos taurus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UOA_Brahman_1

Genomic

  1. NC_040097.1 Reference UOA_Brahman_1

    Range
    33392471..33791715 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027522607.1 → XP_027378408.1  contactin-3 isoform X1

    UniProtKB/TrEMBL
    A0A4W2BMX0, A0A4W2IRF2

  2. XM_027522610.1 → XP_027378411.1  contactin-3 isoform X2

    UniProtKB/TrEMBL
    A0A4W2BMX0

  3. XM_027522611.1 → XP_027378412.1  contactin-3 isoform X3

    UniProtKB/TrEMBL
    A0A4W2BMX0, A0A4W2IMW1

  4. XM_027522609.1 → XP_027378410.1  contactin-3 isoform X1

    UniProtKB/TrEMBL
    A0A4W2BMX0, A0A4W2IRF2

  5. XM_027522612.1 → XP_027378413.1  contactin-3 isoform X3

    UniProtKB/TrEMBL
    A0A4W2BMX0, A0A4W2IMW1
    Related
    ENSBIXP00005046650.1, ENSBIXT00005056443.1

  6. XM_027522608.1 → XP_027378409.1  contactin-3 isoform X1

    UniProtKB/TrEMBL
    A0A4W2BMX0, A0A4W2IRF2
    Related
    ENSBIXP00005046647.1, ENSBIXT00005056440.1
Nucleotide Protein
Heading Accession and Version

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