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si:ch211-199f5.1 protocadherin-8 [ Tachysurus fulvidraco (yellow catfish) ]

Gene ID: 113648758, updated on 10-Apr-2024

Summary

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Gene symbol
si:ch211-199f5.1
Gene description
protocadherin-8
See related
EnsemblRapid:ENSTFUG00005014702
Gene type
protein coding
RefSeq status
MODEL
Organism
Tachysurus fulvidraco
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Bagridae; Tachysurus
Also known as
pcdh8
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 18
Exon count:
3
Annotation release Status Assembly Chr Location
101 current HZAU_PFXX_2.0 (GCF_022655615.1) 18 NC_062535.1 (7842998..7846823)
100 previous assembly ASM372403v1 (GCF_003724035.1) Unplaced Scaffold NW_020847857.1 (5750134..5753974)

Chromosome 18 - NC_062535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein CXorf38 homolog Neighboring gene protocadherin-8-like Neighboring gene chondromodulin Neighboring gene SGT1 homolog, MIS12 kinetochore complex assembly cochaperone

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protocadherin-8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tachysurus fulvidraco Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HZAU_PFXX_2.0

Genomic

  1. NC_062535.1 Reference HZAU_PFXX_2.0

    Range
    7842998..7846823
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027156095.2 → XP_027011896.2  protocadherin-8

    Related
    ENSTFUP00005034155.1, ENSTFUT00005039775.1
Nucleotide Protein
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