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    Atu4597 ABC transporter permease [ Agrobacterium fabrum str. C58 ]

    Gene ID: 1136471, updated on 18-May-2013
    Gene symbol
    Atu4597
    Gene description
    ABC transporter permease
    Locus tag
    Atu4597
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Agrobacterium fabrum str. C58 (old-name: Agrobacterium tumefaciens str. C58, strain: C58, culture-collection: ATCC:33970)
    Lineage
    Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex
    Old locus tag
    AGR_L_128GM
    Location :
    chromosome: linear
    Sequence :
    Chromosome: linear; NC_003063.2 (1743009..1743812, complement)

    Chromosome linear - NC_003063.2Genomic Context describing neighboring genes Neighboring gene dehydrogenase Neighboring gene hypothetical protein Neighboring gene ABC transporter permease Neighboring gene IclR family transcriptional regulator

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58. Goodner B, et al. Science, 2001 Dec 14. PMID 11743194.
    2. The genome of the natural genetic engineer Agrobacterium tumefaciens C58. Wood DW, et al. Science, 2001 Dec 14. PMID 11743193.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    ABC transporter permease

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003063.2

      Range
      1743009..1743812, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_356063.1 ABC transporter permease [Agrobacterium fabrum str. C58]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A9CGV6
      Conserved Domains (2) summary
      cd06261
      Location:62 – 184
      Blast Score: 117
      TM_PBP2; Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and ...
      COG0600
      Location:1 – 256
      Blast Score: 431
      TauC; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version
    genomic AE007870.2 AAK88848.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8U757.1 GenPept

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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