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patz1 POZ/BTB and AT hook containing zinc finger 1 [ Tachysurus fulvidraco (yellow catfish) ]

Gene ID: 113642792, updated on 10-Apr-2024

Summary

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Gene symbol
patz1
Gene description
POZ/BTB and AT hook containing zinc finger 1
See related
EnsemblRapid:ENSTFUG00005032512
Gene type
protein coding
RefSeq status
MODEL
Organism
Tachysurus fulvidraco
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Bagridae; Tachysurus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
101 current HZAU_PFXX_2.0 (GCF_022655615.1) 5 NC_062522.1 (15638734..15649574)
100 previous assembly ASM372403v1 (GCF_003724035.1) Unplaced Scaffold NW_020848416.1 (10805086..10816924, complement)

Chromosome 5 - NC_062522.1Genomic Context describing neighboring genes Neighboring gene SFI1 centrin binding protein Neighboring gene eukaryotic translation initiation factor 4E nuclear import factor 1 Neighboring gene solute carrier family 2 member 11a Neighboring gene transforming growth factor, alpha

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cytokine production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of immune system process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
POZ (BTB) and AT hook-containing zinc finger 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tachysurus fulvidraco Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HZAU_PFXX_2.0

Genomic

  1. NC_062522.1 Reference HZAU_PFXX_2.0

    Range
    15638734..15649574
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027146453.2 → XP_027002254.1  POZ (BTB) and AT hook-containing zinc finger 1 isoform X1

    Related
    ENSTFUP00005056466.1, ENSTFUT00005078884.1

  2. XM_027146454.2 → XP_027002255.1  POZ (BTB) and AT hook-containing zinc finger 1 isoform X2

    Related
    ENSTFUP00005056468.1, ENSTFUT00005078886.1

  3. XM_027146455.2 → XP_027002256.1  POZ (BTB) and AT hook-containing zinc finger 1 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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