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ckap5 cytoskeleton associated protein 5 [ Tachysurus fulvidraco (yellow catfish) ]

Gene ID: 113635767, updated on 10-Apr-2024

Summary

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Gene symbol
ckap5
Gene description
cytoskeleton associated protein 5
See related
EnsemblRapid:ENSTFUG00005014635
Gene type
protein coding
RefSeq status
MODEL
Organism
Tachysurus fulvidraco
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Bagridae; Tachysurus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 17
Exon count:
50
Annotation release Status Assembly Chr Location
101 current HZAU_PFXX_2.0 (GCF_022655615.1) 17 NC_062534.1 (20580219..20612902, complement)
100 previous assembly ASM372403v1 (GCF_003724035.1) Unplaced Scaffold NW_020848201.1 (2409998..2443143)

Chromosome 17 - NC_062534.1Genomic Context describing neighboring genes Neighboring gene lecithin-cholesterol acyltransferase Neighboring gene coiled-coil domain containing 135 Neighboring gene centriolar satellite-associated tubulin polyglutamylase complex regulator 1 Neighboring gene mitogen-activated protein kinase 8 interacting protein 1a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule plus end polymerase IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule plus-end binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in centrosome duplication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment or maintenance of microtubule cytoskeleton polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in microtubule polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic spindle organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in kinetochore IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule plus-end IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle pole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytoskeleton-associated protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tachysurus fulvidraco Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HZAU_PFXX_2.0

Genomic

  1. NC_062534.1 Reference HZAU_PFXX_2.0

    Range
    20580219..20612902 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047802184.1 → XP_047658140.1  cytoskeleton-associated protein 5 isoform X1

  2. XM_047802190.1 → XP_047658146.1  cytoskeleton-associated protein 5 isoform X5

    Related
    ENSTFUP00005034106.1, ENSTFUT00005039705.1

  3. XM_047802189.1 → XP_047658145.1  cytoskeleton-associated protein 5 isoform X4

    Related
    ENSTFUP00005034119.1, ENSTFUT00005039721.1

  4. XM_027135398.2 → XP_026991199.1  cytoskeleton-associated protein 5 isoform X3

    Related
    ENSTFUP00005034080.1, ENSTFUT00005039669.1

  5. XM_047802183.1 → XP_047658139.1  cytoskeleton-associated protein 5 isoform X1

  6. XM_047802188.1 → XP_047658144.1  cytoskeleton-associated protein 5 isoform X2

  7. XM_047802185.1 → XP_047658141.1  cytoskeleton-associated protein 5 isoform X1

  8. XM_047802186.1 → XP_047658142.1  cytoskeleton-associated protein 5 isoform X1

  9. XM_047802187.1 → XP_047658143.1  cytoskeleton-associated protein 5 isoform X1

Nucleotide Protein
Heading Accession and Version

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