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ALCAM activated leukocyte cell adhesion molecule [ Lagenorhynchus obliquidens (Pacific white-sided dolphin) ]

Gene ID: 113619213, updated on 15-Mar-2024

Summary

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Gene symbol
ALCAM
Gene description
activated leukocyte cell adhesion molecule
See related
EnsemblRapid:ENSLOBG00000000055
Gene type
protein coding
RefSeq status
MODEL
Organism
Lagenorhynchus obliquidens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Lagenorhynchus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ASM367639v1 (GCF_003676395.1) Unplaced Scaffold NW_020837945.1 (52222288..52424059)

NW_020837945.1Genomic Context describing neighboring genes Neighboring gene calcium-binding mitochondrial carrier protein SCaMC-2 pseudogene Neighboring gene ribosomal protein L18-like Neighboring gene 40S ribosomal protein S15 pseudogene Neighboring gene Cbl proto-oncogene B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020837945 Unplaced Scaffold Reference ASM367639v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CD166 antigen

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lagenorhynchus obliquidens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM367639v1 Primary Assembly

Genomic

  1. NW_020837945.1 Reference ASM367639v1 Primary Assembly

    Range
    52222288..52424059
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027104028.1 → XP_026959829.1  CD166 antigen isoform X2

    Related
    ENSLOBP00000000035.1, ENSLOBT00000000063.1
    Conserved Domains (5) summary
    smart00406
    Location:38 → 113
    IGv; Immunoglobulin V-Type
    smart00410
    Location:339 → 393
    IG_like; Immunoglobulin like
    pfam08205
    Location:137 → 231
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13927
    Location:415 → 489
    Ig_3; Immunoglobulin domain
    cd00096
    Location:137 → 141
    Ig; Ig strand A' [structural motif]

  2. XM_027104027.1 → XP_026959828.1  CD166 antigen isoform X1

    Related
    ENSLOBP00000000027.1, ENSLOBT00000000055.1
    Conserved Domains (5) summary
    smart00406
    Location:38 → 113
    IGv; Immunoglobulin V-Type
    smart00410
    Location:339 → 393
    IG_like; Immunoglobulin like
    pfam08205
    Location:137 → 231
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13927
    Location:415 → 489
    Ig_3; Immunoglobulin domain
    cd00096
    Location:137 → 141
    Ig; Ig strand A' [structural motif]
Nucleotide Protein
Heading Accession and Version

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