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PRDM8 PR/SET domain 8 [ Lagenorhynchus obliquidens (Pacific white-sided dolphin) ]

Gene ID: 113609878, updated on 15-Mar-2024

Summary

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Gene symbol
PRDM8
Gene description
PR/SET domain 8
See related
EnsemblRapid:ENSLOBG00000018576
Gene type
protein coding
RefSeq status
MODEL
Organism
Lagenorhynchus obliquidens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Lagenorhynchus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM367639v1 (GCF_003676395.1) Unplaced Scaffold NW_020838003.1 (7912217..7919683)

NW_020838003.1Genomic Context describing neighboring genes Neighboring gene ANTXR cell adhesion molecule 2 Neighboring gene uncharacterized LOC113609902 Neighboring gene proliferating cell nuclear antigen-like Neighboring gene fibroblast growth factor 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020838003 Unplaced Scaffold Reference ASM367639v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PR domain zinc finger protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lagenorhynchus obliquidens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM367639v1 Primary Assembly

Genomic

  1. NW_020838003.1 Reference ASM367639v1 Primary Assembly

    Range
    7912217..7919683
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027087591.1 → XP_026943392.1  PR domain zinc finger protein 8

    Conserved Domains (3) summary
    sd00017
    Location:625 → 645
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:665 → 686
    zf-C2H2; Zinc finger, C2H2 type
    cd19192
    Location:6 → 138
    PR-SET_PRDM8; PR-SET domain found in PR domain zinc finger protein 8 (PRDM8) and similar proteins

  2. XM_027087592.1 → XP_026943393.1  PR domain zinc finger protein 8

    Related
    ENSLOBP00000025117.1, ENSLOBT00000027509.1
    Conserved Domains (3) summary
    sd00017
    Location:625 → 645
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:665 → 686
    zf-C2H2; Zinc finger, C2H2 type
    cd19192
    Location:6 → 138
    PR-SET_PRDM8; PR-SET domain found in PR domain zinc finger protein 8 (PRDM8) and similar proteins
Nucleotide Protein
Heading Accession and Version

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