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srebf1 sterol regulatory element binding transcription factor 1 [ Electrophorus electricus (electric eel) ]

Gene ID: 113592372, updated on 15-Mar-2024

Summary

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Gene symbol
srebf1
Gene description
sterol regulatory element binding transcription factor 1
See related
EnsemblRapid:ENSEEEG00000014423
Gene type
protein coding
RefSeq status
MODEL
Organism
Electrophorus electricus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Gymnotiformes; Gymnotoidei; Gymnotidae; Electrophorus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 1
Exon count:
19
Annotation release Status Assembly Chr Location
101 current fEleEle1.pri (GCF_013358815.1) 1 NC_049535.1 (30616436..30632750, complement)
100 previous assembly Ee_SOAP_WITH_SSPACE (GCF_003665695.1) Unplaced Scaffold NW_020827123.1 (10975..27043)

Chromosome 1 - NC_049535.1Genomic Context describing neighboring genes Neighboring gene FAM20C golgi associated secretory pathway kinase a Neighboring gene retinoic acid-induced protein 1 Neighboring gene TOM1-like protein 2 Neighboring gene dynein regulatory complex subunit 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sterol regulatory element-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Electrophorus electricus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEleEle1.pri

Genomic

  1. NC_049535.1 Reference fEleEle1.pri

    Range
    30616436..30632750 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035524528.1 → XP_035380421.1  sterol regulatory element-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A4W4G1F4
    Related
    ENSEEEP00000053154.1, ENSEEET00000061563.1
    Conserved Domains (2) summary
    PHA03247
    Location:55 → 247
    PHA03247; large tegument protein UL36; Provisional
    cd18921
    Location:326 → 399
    bHLHzip_SREBP1; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in sterol regulatory element-binding protein 1 (SREBP1) and similar proteins

  2. XM_035524527.1 → XP_035380420.1  sterol regulatory element-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A4W4G1F4
    Conserved Domains (2) summary
    PHA03247
    Location:55 → 207
    PHA03247; large tegument protein UL36; Provisional
    cd18921
    Location:327 → 400
    bHLHzip_SREBP1; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in sterol regulatory element-binding protein 1 (SREBP1) and similar proteins

  3. XM_035524524.1 → XP_035380417.1  sterol regulatory element-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A4W4G1F4
    Conserved Domains (2) summary
    PHA03247
    Location:55 → 207
    PHA03247; large tegument protein UL36; Provisional
    cd18921
    Location:327 → 400
    bHLHzip_SREBP1; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in sterol regulatory element-binding protein 1 (SREBP1) and similar proteins

  4. XM_035524523.1 → XP_035380416.1  sterol regulatory element-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A4W4G1F4
    Related
    ENSEEEP00000030097.2, ENSEEET00000030450.2
    Conserved Domains (2) summary
    PHA03247
    Location:55 → 207
    PHA03247; large tegument protein UL36; Provisional
    cd18921
    Location:327 → 400
    bHLHzip_SREBP1; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in sterol regulatory element-binding protein 1 (SREBP1) and similar proteins
Nucleotide Protein
Heading Accession and Version

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