U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

sfr1 SWI5-dependent homologous recombination repair protein 1 [ Electrophorus electricus (electric eel) ]

Gene ID: 113582038, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
sfr1
Gene description
SWI5-dependent homologous recombination repair protein 1
See related
EnsemblRapid:ENSEEEG00000002293
Gene type
protein coding
RefSeq status
MODEL
Organism
Electrophorus electricus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Gymnotiformes; Gymnotoidei; Gymnotidae; Electrophorus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 11
Exon count:
3
Annotation release Status Assembly Chr Location
101 current fEleEle1.pri (GCF_013358815.1) 11 NC_049545.1 (5130446..5132010, complement)
100 previous assembly Ee_SOAP_WITH_SSPACE (GCF_003665695.1) Unplaced Scaffold NW_020826227.1 (286645..288205)

Chromosome 11 - NC_049545.1Genomic Context describing neighboring genes Neighboring gene sperm flagellar 1 Neighboring gene ER lipid raft associated 1 Neighboring gene cilia and flagella associated protein 43 Neighboring gene collagen, type XVII, alpha 1b Neighboring gene STE20-like kinase a

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear receptor coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Swi5-Sfr1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
swi5-dependent recombination DNA repair protein 1 homolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Electrophorus electricus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEleEle1.pri

Genomic

  1. NC_049545.1 Reference fEleEle1.pri

    Range
    5130446..5132010 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027017576.2 → XP_026873377.2  swi5-dependent recombination DNA repair protein 1 homolog isoform X2

    UniProtKB/TrEMBL
    A0A4W4DYJ8
    Related
    ENSEEEP00000004360.2, ENSEEET00000004421.2
    Conserved Domains (1) summary
    pfam10376
    Location:25 → 189
    Mei5; Double-strand recombination repair protein

  2. XM_027017575.2 → XP_026873376.2  swi5-dependent recombination DNA repair protein 1 homolog isoform X1

    UniProtKB/TrEMBL
    A0A4W4DYJ8
    Conserved Domains (1) summary
    pfam10376
    Location:11 → 190
    Mei5; Double-strand recombination repair protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.