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mtm1 myotubularin 1 [ Electrophorus electricus (electric eel) ]

Gene ID: 113580799, updated on 15-Mar-2024

Summary

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Gene symbol
mtm1
Gene description
myotubularin 1
See related
EnsemblRapid:ENSEEEG00000011644
Gene type
protein coding
RefSeq status
MODEL
Organism
Electrophorus electricus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Gymnotiformes; Gymnotoidei; Gymnotidae; Electrophorus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 19
Exon count:
16
Annotation release Status Assembly Chr Location
101 current fEleEle1.pri (GCF_013358815.1) 19 NC_049553.1 (6035684..6050637, complement)
100 previous assembly Ee_SOAP_WITH_SSPACE (GCF_003665695.1) Unplaced Scaffold NW_020826184.1 (52837..67854)

Chromosome 19 - NC_049553.1Genomic Context describing neighboring genes Neighboring gene CD99 molecule-like 2 Neighboring gene myotubularin related protein 1a Neighboring gene mastermind-like domain-containing protein 1 Neighboring gene dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrion distribution IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in muscle cell cellular homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myotubularin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Electrophorus electricus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEleEle1.pri

Genomic

  1. NC_049553.1 Reference fEleEle1.pri

    Range
    6035684..6050637 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027015583.2 → XP_026871384.2  myotubularin isoform X2

    UniProtKB/TrEMBL
    A0A4W4FGI3
    Related
    ENSEEEP00000023977.2, ENSEEET00000024249.2
    Conserved Domains (2) summary
    pfam06602
    Location:161 → 485
    Myotub-related; Myotubularin-like phosphatase domain
    cl17171
    Location:45 → 144
    PH-like; Pleckstrin homology-like domain

  2. XM_027015582.2 → XP_026871383.2  myotubularin isoform X1

    UniProtKB/TrEMBL
    A0A4W4FGI3
    Conserved Domains (2) summary
    pfam06602
    Location:161 → 504
    Myotub-related; Myotubularin-like phosphatase domain
    cl17171
    Location:45 → 144
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
Heading Accession and Version

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