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atf4a activating transcription factor 4a [ Electrophorus electricus (electric eel) ]

Gene ID: 113579485, updated on 15-Mar-2024

Summary

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Gene symbol
atf4a
Gene description
activating transcription factor 4a
See related
EnsemblRapid:ENSEEEG00000004858
Gene type
protein coding
RefSeq status
MODEL
Organism
Electrophorus electricus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Gymnotiformes; Gymnotoidei; Gymnotidae; Electrophorus
Also known as
atf4
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
101 current fEleEle1.pri (GCF_013358815.1) 1 NC_049535.1 (14235064..14238231, complement)
100 previous assembly Ee_SOAP_WITH_SSPACE (GCF_003665695.1) Unplaced Scaffold NW_020825950.1 (543275..546392)

Chromosome 1 - NC_049535.1Genomic Context describing neighboring genes Neighboring gene G-protein coupled receptor 35-like Neighboring gene uncharacterized LOC113579509 Neighboring gene uncharacterized LOC113579536 Neighboring gene ribosomal protein S19 binding protein 1 Neighboring gene 3-mercaptopyruvate sulfurtransferase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ATF1-ATF4 transcription factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ATF4-CREB1 transcription factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclic AMP-dependent transcription factor ATF-4
Names
activating transcription factor 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Electrophorus electricus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEleEle1.pri

Genomic

  1. NC_049535.1 Reference fEleEle1.pri

    Range
    14235064..14238231 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027013466.2 → XP_026869267.2  cyclic AMP-dependent transcription factor ATF-4

    UniProtKB/TrEMBL
    A0A4W4EBS3
    Related
    ENSEEEP00000009509.2, ENSEEET00000009627.2
    Conserved Domains (1) summary
    cd14692
    Location:332 → 394
    bZIP_ATF4; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-4 (ATF-4) and similar proteins: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

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