U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

trim33 tripartite motif containing 33 [ Electrophorus electricus (electric eel) ]

Gene ID: 113577374, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
trim33
Gene description
tripartite motif containing 33
See related
EnsemblRapid:ENSEEEG00000021867
Gene type
protein coding
RefSeq status
MODEL
Organism
Electrophorus electricus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Gymnotiformes; Gymnotoidei; Gymnotidae; Electrophorus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See trim33 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
20
Annotation release Status Assembly Chr Location
101 current fEleEle1.pri (GCF_013358815.1) 23 NC_049557.1 (8669127..8687116, complement)
100 previous assembly Ee_SOAP_WITH_SSPACE (GCF_003665695.1) Unplaced Scaffold NW_020826085.1 (605849..626111)

Chromosome 23 - NC_049557.1Genomic Context describing neighboring genes Neighboring gene nuclear receptor subfamily 1, group H, member 5 Neighboring gene solute carrier family 66 member 1 Neighboring gene BCAS2 pre-mRNA processing factor Neighboring gene DENN/MADD domain containing 2C Neighboring gene adenosine monophosphate deaminase 1 (isoform M)

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
E3 ubiquitin-protein ligase TRIM33

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Electrophorus electricus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEleEle1.pri

Genomic

  1. NC_049557.1 Reference fEleEle1.pri

    Range
    8669127..8687116 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035522005.1 → XP_035377898.1  E3 ubiquitin-protein ligase TRIM33 isoform X4

    UniProtKB/TrEMBL
    A0A4W4HDZ2
    Conserved Domains (8) summary
    cd05502
    Location:1015 → 1123
    Bromo_tif1_like; Bromodomain; tif1_like subfamily. Tif1 (transcription intermediary factor 1) is a member of the tripartite motif (TRIM) protein family, which is characterized by a particular domain architecture. It functions by recruiting coactivators and/or ...
    smart00502
    Location:330 → 456
    BBC; B-Box C-terminal domain
    cd15541
    Location:946 → 988
    PHD_TIF1_like; PHD finger found in the transcriptional intermediary factor 1 (TIF1) family and similar proteins
    pfam05109
    Location:594 → 898
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cd16766
    Location:132 → 198
    RING-HC_TIF1gamma; RING finger, HC subclass, found in transcriptional inknown asiary factor 1 gamma (TIF1gamma)
    cd19830
    Location:279 → 331
    Bbox2_TIF1g_C-VI; B-box-type 2 zinc finger found in transcription intermediary factor 1 gamma (TIF1-gamma)
    cd19847
    Location:221 → 273
    Bbox1_TIF1g_C-VI; B-box-type 1 zinc finger found in transcriptional intermediary factor 1 gamma (TIF1-gamma)
    pfam03154
    Location:604 → 750
    Atrophin-1; Atrophin-1 family

  2. XM_027009985.2 → XP_026865786.2  E3 ubiquitin-protein ligase TRIM33 isoform X2

    UniProtKB/TrEMBL
    A0A4W4HDZ2
    Related
    ENSEEEP00000047211.2, ENSEEET00000047732.2
    Conserved Domains (7) summary
    cd05502
    Location:1036 → 1144
    Bromo_tif1_like; Bromodomain; tif1_like subfamily. Tif1 (transcription intermediary factor 1) is a member of the tripartite motif (TRIM) protein family, which is characterized by a particular domain architecture. It functions by recruiting coactivators and/or ...
    smart00502
    Location:330 → 456
    BBC; B-Box C-terminal domain
    PHA03307
    Location:597 → 956
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15541
    Location:967 → 1009
    PHD_TIF1_like; PHD finger found in the transcriptional intermediary factor 1 (TIF1) family and similar proteins
    cd16766
    Location:132 → 198
    RING-HC_TIF1gamma; RING finger, HC subclass, found in transcriptional inknown asiary factor 1 gamma (TIF1gamma)
    cd19830
    Location:279 → 331
    Bbox2_TIF1g_C-VI; B-box-type 2 zinc finger found in transcription intermediary factor 1 gamma (TIF1-gamma)
    cd19847
    Location:221 → 273
    Bbox1_TIF1g_C-VI; B-box-type 1 zinc finger found in transcriptional intermediary factor 1 gamma (TIF1-gamma)

  3. XM_027009986.2 → XP_026865787.2  E3 ubiquitin-protein ligase TRIM33 isoform X3

    UniProtKB/TrEMBL
    A0A4W4H6W9
    Related
    ENSEEEP00000047219.2, ENSEEET00000047740.2
    Conserved Domains (7) summary
    cd05502
    Location:1015 → 1140
    Bromo_tif1_like; Bromodomain; tif1_like subfamily. Tif1 (transcription intermediary factor 1) is a member of the tripartite motif (TRIM) protein family, which is characterized by a particular domain architecture. It functions by recruiting coactivators and/or ...
    smart00502
    Location:330 → 456
    BBC; B-Box C-terminal domain
    cd15541
    Location:946 → 988
    PHD_TIF1_like; PHD finger found in the transcriptional intermediary factor 1 (TIF1) family and similar proteins
    pfam05109
    Location:594 → 898
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cd16766
    Location:132 → 198
    RING-HC_TIF1gamma; RING finger, HC subclass, found in transcriptional inknown asiary factor 1 gamma (TIF1gamma)
    cd19830
    Location:279 → 331
    Bbox2_TIF1g_C-VI; B-box-type 2 zinc finger found in transcription intermediary factor 1 gamma (TIF1-gamma)
    cd19847
    Location:221 → 273
    Bbox1_TIF1g_C-VI; B-box-type 1 zinc finger found in transcriptional intermediary factor 1 gamma (TIF1-gamma)

  4. XM_027009984.2 → XP_026865785.2  E3 ubiquitin-protein ligase TRIM33 isoform X1

    UniProtKB/TrEMBL
    A0A4W4H6W1
    Related
    ENSEEEP00000047263.2, ENSEEET00000047785.2
    Conserved Domains (7) summary
    cd05502
    Location:1036 → 1161
    Bromo_tif1_like; Bromodomain; tif1_like subfamily. Tif1 (transcription intermediary factor 1) is a member of the tripartite motif (TRIM) protein family, which is characterized by a particular domain architecture. It functions by recruiting coactivators and/or ...
    smart00502
    Location:330 → 456
    BBC; B-Box C-terminal domain
    PHA03307
    Location:597 → 956
    PHA03307; transcriptional regulator ICP4; Provisional
    cd15541
    Location:967 → 1009
    PHD_TIF1_like; PHD finger found in the transcriptional intermediary factor 1 (TIF1) family and similar proteins
    cd16766
    Location:132 → 198
    RING-HC_TIF1gamma; RING finger, HC subclass, found in transcriptional inknown asiary factor 1 gamma (TIF1gamma)
    cd19830
    Location:279 → 331
    Bbox2_TIF1g_C-VI; B-box-type 2 zinc finger found in transcription intermediary factor 1 gamma (TIF1-gamma)
    cd19847
    Location:221 → 273
    Bbox1_TIF1g_C-VI; B-box-type 1 zinc finger found in transcriptional intermediary factor 1 gamma (TIF1-gamma)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.