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atp5mc3b ATP synthase membrane subunit c locus 3b [ Pangasianodon hypophthalmus (striped catfish) ]

Gene ID: 113538463, updated on 15-Mar-2024

Summary

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Gene symbol
atp5mc3b
Gene description
ATP synthase membrane subunit c locus 3b
Locus tag
PHYPO_G00109300
See related
EnsemblRapid:ENSPHYG00025008345
Gene type
protein coding
RefSeq status
MODEL
Organism
Pangasianodon hypophthalmus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae; Pangasianodon
Also known as
atp5mc3
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_02 current fPanHyp1.pri (GCF_027358585.1) 2 NC_069711.1 (32162372..32167564, complement)

Chromosome 2 - NC_069711.1Genomic Context describing neighboring genes Neighboring gene WAS/WASL interacting protein family, member 1b Neighboring gene cholinergic receptor, nicotinic, alpha 1 (muscle) Neighboring gene lunapark, ER junction formation factor Neighboring gene metaxin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069711.1 Chromosome 2 Reference fPanHyp1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton motive force-driven ATP synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP synthase membrane subunit c locus 3b
Names
ATP synthase membrane subunit c locus 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027358585.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPanHyp1.pri

Genomic

  1. NC_069711.1 Reference fPanHyp1.pri

    Range
    32162372..32167564 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026933548.3 → XP_026789349.3  ATP synthase membrane subunit c locus 3b

  2. XM_026933549.3 → XP_026789350.3  ATP synthase membrane subunit c locus 3b

    Related
    ENSPHYP00025018702.1, ENSPHYT00025020244.1
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases