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ufc1 ubiquitin-fold modifier conjugating enzyme 1 [ Pangasianodon hypophthalmus (striped catfish) ]

Gene ID: 113531510, updated on 15-Mar-2024

Summary

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Gene symbol
ufc1
Gene description
ubiquitin-fold modifier conjugating enzyme 1
Locus tag
PHYPO_G00161910
See related
EnsemblRapid:ENSPHYG00025008472
Gene type
protein coding
RefSeq status
MODEL
Organism
Pangasianodon hypophthalmus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae; Pangasianodon
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 27
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_02 current fPanHyp1.pri (GCF_027358585.1) 27 NC_069736.1 (15444367..15447084, complement)

Chromosome 27 - NC_069736.1Genomic Context describing neighboring genes Neighboring gene ferredoxin-fold anticodon binding domain containing 1 Neighboring gene grass carp reovirus (GCRV)-induced gene 2p Neighboring gene uncharacterized LOC113531505 Neighboring gene cytokine receptor family member B12

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069736.1 Chromosome 27 Reference fPanHyp1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UFM1 conjugating enzyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein K69-linked ufmylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-fold modifier-conjugating enzyme 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027358585.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPanHyp1.pri

Genomic

  1. NC_069736.1 Reference fPanHyp1.pri

    Range
    15444367..15447084 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026922286.3 → XP_026778087.1  ubiquitin-fold modifier-conjugating enzyme 1

    UniProtKB/TrEMBL
    A0A5N5JTU7
    Related
    ENSPHYP00025018929.1, ENSPHYT00025020495.1
    Conserved Domains (1) summary
    pfam08694
    Location:6 → 160
    UFC1; Ubiquitin-fold modifier-conjugating enzyme 1
Nucleotide Protein
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