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BOC BOC cell adhesion associated, oncogene regulated [ Athene cunicularia (burrowing owl) ]

Gene ID: 113483539, updated on 15-Mar-2024

Summary

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Gene symbol
BOC
Gene description
BOC cell adhesion associated, oncogene regulated
See related
Ensembl:ENSACUG00000000519
Gene type
protein coding
RefSeq status
MODEL
Organism
Athene cunicularia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Strigiformes; Strigidae; Athene
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
21
Annotation release Status Assembly Chr Location
100 current athCun1 (GCF_003259725.1) 1 Unlocalized Scaffold NW_020799091.1 (121276362..121337288)

NW_020799091.1Genomic Context describing neighboring genes Neighboring gene protein spire homolog 1-like Neighboring gene nucleolus and neural progenitor protein Neighboring gene uncharacterized LOC113483568 Neighboring gene cilia and flagella associated protein 44 Neighboring gene immunoglobulin like domain containing receptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020799091 Chromosome 1 Unlocalized Scaffold Reference athCun1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
brother of CDO

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Athene cunicularia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference athCun1

Genomic

  1. NW_020799091.1 Reference athCun1

    Range
    121276362..121337288
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026855207.1 → XP_026711008.1  brother of CDO isoform X1

    UniProtKB/TrEMBL
    A0A663LLA4
    Conserved Domains (6) summary
    cd00063
    Location:602 → 689
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:488 → 553
    fn3; Fibronectin type III domain
    pfam13927
    Location:226 → 299
    Ig_3; Immunoglobulin domain
    pfam16625
    Location:405 → 468
    ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
    cl11960
    Location:139 → 200
    Ig; Immunoglobulin domain
    cl28434
    Location:319 → 402
    I-set; Immunoglobulin I-set domain

  2. XM_026855175.1 → XP_026710976.1  brother of CDO isoform X1

    UniProtKB/TrEMBL
    A0A663LLA4
    Conserved Domains (6) summary
    cd00063
    Location:602 → 689
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:488 → 553
    fn3; Fibronectin type III domain
    pfam13927
    Location:226 → 299
    Ig_3; Immunoglobulin domain
    pfam16625
    Location:405 → 468
    ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
    cl11960
    Location:139 → 200
    Ig; Immunoglobulin domain
    cl28434
    Location:319 → 402
    I-set; Immunoglobulin I-set domain

  3. XM_026855165.1 → XP_026710966.1  brother of CDO isoform X1

    UniProtKB/TrEMBL
    A0A663LLA4

  4. XM_026855191.1 → XP_026710992.1  brother of CDO isoform X3

    UniProtKB/TrEMBL
    A0A663LLA4
    Related
    ENSACUP00000000715.1, ENSACUT00000000773.1
    Conserved Domains (6) summary
    cd00063
    Location:600 → 687
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:488 → 553
    fn3; Fibronectin type III domain
    pfam13927
    Location:226 → 299
    Ig_3; Immunoglobulin domain
    pfam16625
    Location:405 → 468
    ISET-FN3_linker; Unstructured linking region I-set and fnIII on Brother of CDO
    cl11960
    Location:139 → 200
    Ig; Immunoglobulin domain
    cl28434
    Location:319 → 402
    I-set; Immunoglobulin I-set domain

  5. XM_026855184.1 → XP_026710985.1  brother of CDO isoform X2

    UniProtKB/TrEMBL
    A0A663LLA4

  6. XM_026855202.1 → XP_026711003.1  brother of CDO isoform X4

    UniProtKB/TrEMBL
    A0A663LLA4
Nucleotide Protein
Heading Accession and Version

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