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ITGA6 integrin subunit alpha 6 [ Athene cunicularia (burrowing owl) ]

Gene ID: 113482064, updated on 15-Mar-2024

Summary

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Gene symbol
ITGA6
Gene description
integrin subunit alpha 6
See related
Ensembl:ENSACUG00000007462
Gene type
protein coding
RefSeq status
MODEL
Organism
Athene cunicularia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Strigiformes; Strigidae; Athene
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
25
Annotation release Status Assembly Chr Location
100 current athCun1 (GCF_003259725.1) 7 Unlocalized Scaffold NW_020799107.1 (15372507..15397171, complement)

NW_020799107.1Genomic Context describing neighboring genes Neighboring gene neurabin-1-like Neighboring gene pyruvate dehydrogenase kinase 1 Neighboring gene methionyl aminopeptidase type 1D, mitochondrial Neighboring gene histone acetyltransferase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020799107 Chromosome 7 Unlocalized Scaffold Reference athCun1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in leukocyte migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin alpha-6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Athene cunicularia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference athCun1

Genomic

  1. NW_020799107.1 Reference athCun1

    Range
    15372507..15397171 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026852387.1 → XP_026708188.1  integrin alpha-6 isoform X3

    UniProtKB/TrEMBL
    A0A663MF73, A0A663MF78
    Related
    ENSACUP00000011010.1, ENSACUT00000011753.1

  2. XM_026852388.1 → XP_026708189.1  integrin alpha-6 isoform X4

    UniProtKB/TrEMBL
    A0A663MI50
    Related
    ENSACUP00000010998.1, ENSACUT00000011741.1
    Conserved Domains (3) summary
    smart00191
    Location:268 → 319
    Int_alpha; Integrin alpha (beta-propellor repeats)
    pfam00357
    Location:937 → 951
    Integrin_alpha; Integrin alpha cytoplasmic region
    pfam08441
    Location:361 → 838
    Integrin_alpha2; Integrin alpha

  3. XM_026852386.1 → XP_026708187.1  integrin alpha-6 isoform X2

    UniProtKB/TrEMBL
    A0A663MI50
    Conserved Domains (2) summary
    smart00191
    Location:224 → 275
    Int_alpha; Integrin alpha (beta-propellor repeats)
    pfam08441
    Location:317 → 794
    Integrin_alpha2; Integrin alpha

  4. XM_026852385.1 → XP_026708186.1  integrin alpha-6 isoform X1

    UniProtKB/TrEMBL
    A0A663MI50
Nucleotide Protein
Heading Accession and Version

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