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ZC3H12D zinc finger CCCH-type containing 12D [ Athene cunicularia (burrowing owl) ]

Gene ID: 113478414, updated on 15-Mar-2024

Summary

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Gene symbol
ZC3H12D
Gene description
zinc finger CCCH-type containing 12D
Gene type
protein coding
RefSeq status
MODEL
Organism
Athene cunicularia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Strigiformes; Strigidae; Athene
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
100 current athCun1 (GCF_003259725.1) 3 Unlocalized Scaffold NW_020799097.1 (70937324..70947585)

NW_020799097.1Genomic Context describing neighboring genes Neighboring gene glycosylated integral membrane protein 1 Neighboring gene peptidylprolyl isomerase like 4 Neighboring gene TGF-beta activated kinase 1 (MAP3K7) binding protein 2 Neighboring gene uronyl 2-sulfotransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020799097 Chromosome 3 Unlocalized Scaffold Reference athCun1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 3'-UTR-mediated mRNA destabilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear-transcribed mRNA catabolic process, RNase MRP-dependent IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic ribonucleoprotein granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ribonuclease ZC3H12D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Athene cunicularia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference athCun1

Genomic

  1. NW_020799097.1 Reference athCun1

    Range
    70937324..70947585
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026845617.1 → XP_026701418.1  probable ribonuclease ZC3H12D

    Conserved Domains (1) summary
    pfam11977
    Location:114 → 270
    RNase_Zc3h12a; Zc3h12a-like Ribonuclease NYN domain
Nucleotide Protein
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