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CLCN4 chloride voltage-gated channel 4 [ Pseudonaja textilis ]

Gene ID: 113445207, updated on 15-Mar-2024

Summary

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Gene symbol
CLCN4
Gene description
chloride voltage-gated channel 4
See related
Ensembl:ENSPTXG00000006132
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudonaja textilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Pseudonaja
Orthologs
human mouse all
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Genomic context

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See CLCN4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current EBS10Xv2-PRI (GCF_900518735.1) Unplaced Scaffold NW_020769376.1 (159892..191260)

NW_020769376.1Genomic Context describing neighboring genes Neighboring gene shroom family member 2 Neighboring gene WWC family member 3 Neighboring gene uncharacterized LOC113445208 Neighboring gene midline 1 Neighboring gene Rho GTPase activating protein 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020769376 Unplaced Scaffold Reference EBS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables voltage-gated chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
H(+)/Cl(-) exchange transporter 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudonaja textilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EBS10Xv2-PRI

Genomic

  1. NW_020769376.1 Reference EBS10Xv2-PRI

    Range
    159892..191260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026714273.1 → XP_026570058.1  H(+)/Cl(-) exchange transporter 4 isoform X1

    UniProtKB/TrEMBL
    A0A670Y9W1, A0A670YG89
    Related
    ENSPTXP00000008501.1, ENSPTXT00000008795.1
    Conserved Domains (2) summary
    cd03684
    Location:78 → 584
    ClC_3_like; ClC-3-like chloride channel proteins. This CD includes ClC-3, ClC-4, ClC-5 and ClC-Y1. ClC-3 was initially cloned from rat kidney. Expression of ClC-3 produces outwardly-rectifying Cl currents that are inhibited by protein kinase C activation. It has ...
    cd04591
    Location:607 → 743
    CBS_pair_EriC_assoc_euk_bac; This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the EriC CIC-type chloride channels in eukaryotes and bacteria. These ion channels are proteins with a seemingly simple task of allowing the passive flow of ...

  2. XM_026714274.1 → XP_026570059.1  H(+)/Cl(-) exchange transporter 4 isoform X2

    UniProtKB/TrEMBL
    A0A670YG89
    Conserved Domains (2) summary
    cd03684
    Location:78 → 557
    ClC_3_like; ClC-3-like chloride channel proteins. This CD includes ClC-3, ClC-4, ClC-5 and ClC-Y1. ClC-3 was initially cloned from rat kidney. Expression of ClC-3 produces outwardly-rectifying Cl currents that are inhibited by protein kinase C activation. It has ...
    cd04591
    Location:580 → 716
    CBS_pair_EriC_assoc_euk_bac; This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the EriC CIC-type chloride channels in eukaryotes and bacteria. These ion channels are proteins with a seemingly simple task of allowing the passive flow of ...
Nucleotide Protein
Heading Accession and Version

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