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ALKBH5 alkB homolog 5, RNA demethylase [ Pseudonaja textilis ]

Gene ID: 113438844, updated on 11-Apr-2024

Summary

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Gene symbol
ALKBH5
Gene description
alkB homolog 5, RNA demethylase
See related
Ensembl:ENSPTXG00000003005
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudonaja textilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Pseudonaja
Orthologs
human mouse all
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Genomic context

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See ALKBH5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current EBS10Xv2-PRI (GCF_900518735.1) Unplaced Scaffold NW_020769332.1 (14822465..14840243)

NW_020769332.1Genomic Context describing neighboring genes Neighboring gene GID complex subunit 4 homolog Neighboring gene developmentally regulated GTP binding protein 2 Neighboring gene myosin XVA Neighboring gene LLGL scribble cell polarity complex component 1 Neighboring gene FLII actin remodeling protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020769332 Unplaced Scaffold Reference EBS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidative RNA demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA demethylase ALKBH5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudonaja textilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EBS10Xv2-PRI

Genomic

  1. NW_020769332.1 Reference EBS10Xv2-PRI

    Range
    14822465..14840243
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026704414.1 → XP_026560199.1  RNA demethylase ALKBH5

    UniProtKB/TrEMBL
    A0A670XZC2
    Related
    ENSPTXP00000004063.1, ENSPTXT00000004182.1
    Conserved Domains (1) summary
    cl21496
    Location:89 → 265
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
Nucleotide Protein
Heading Accession and Version

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