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ZFAT zinc finger and AT-hook domain containing [ Pseudonaja textilis ]

Gene ID: 113438338, updated on 15-Mar-2024

Summary

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Gene symbol
ZFAT
Gene description
zinc finger and AT-hook domain containing
See related
Ensembl:ENSPTXG00000005965
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudonaja textilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Pseudonaja
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current EBS10Xv2-PRI (GCF_900518735.1) Unplaced Scaffold NW_020769330.1 (14492062..14616186, complement)

NW_020769330.1Genomic Context describing neighboring genes Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 1 Neighboring gene uncharacterized LOC113438346 Neighboring gene uncharacterized LOC113438339 Neighboring gene KH RNA binding domain containing, signal transduction associated 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020769330 Unplaced Scaffold Reference EBS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein ZFAT

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudonaja textilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EBS10Xv2-PRI

Genomic

  1. NW_020769330.1 Reference EBS10Xv2-PRI

    Range
    14492062..14616186 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026703688.1 → XP_026559473.1  zinc finger protein ZFAT

    UniProtKB/TrEMBL
    A0A670YFG0
    Related
    ENSPTXP00000008227.1, ENSPTXT00000008516.1
    Conserved Domains (5) summary
    sd00017
    Location:271 → 291
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:354 → 375
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:269 → 291
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:283 → 307
    zf-H2C2_2; Zinc-finger double domain
    pfam13909
    Location:297 → 321
    zf-H2C2_5; C2H2-type zinc-finger domain
Nucleotide Protein
Heading Accession and Version

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