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ATAD2 ATPase family AAA domain containing 2 [ Pseudonaja textilis ]

Gene ID: 113438295, updated on 15-Mar-2024

Summary

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Gene symbol
ATAD2
Gene description
ATPase family AAA domain containing 2
See related
Ensembl:ENSPTXG00000004165
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudonaja textilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Pseudonaja
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
100 current EBS10Xv2-PRI (GCF_900518735.1) Unplaced Scaffold NW_020769330.1 (9306858..9342084, complement)

NW_020769330.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein C8orf76 homolog Neighboring gene zinc fingers and homeoboxes 1 Neighboring gene N-terminal glutamine amidase 1 Neighboring gene F-box protein 32

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020769330 Unplaced Scaffold Reference EBS10Xv2-PRI

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATPase family AAA domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudonaja textilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EBS10Xv2-PRI

Genomic

  1. NW_020769330.1 Reference EBS10Xv2-PRI

    Range
    9306858..9342084 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026703624.1 → XP_026559409.1  ATPase family AAA domain-containing protein 2

    UniProtKB/TrEMBL
    A0A670Y1N0
    Related
    ENSPTXP00000005721.1, ENSPTXT00000005903.1
    Conserved Domains (3) summary
    cd05528
    Location:969 → 1080
    Bromo_AAA; Bromodomain; sub-family co-occurring with AAA domains. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine. The structure(2DKW) in this ...
    COG0464
    Location:392 → 674
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
    cl27568
    Location:802 → 927
    TIP49; TIP49 C-terminus
Nucleotide Protein
Heading Accession and Version

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